FMO13854.5prime Sequence
516 bp (505 high quality bases) assembled on 2013-10-14
> FMO13854.5prime
TCAGTCGACATGGCAGATAAGGCGCAGGAACAAAGTATAATGGACAAGTC
CATGCGGTCGGTTTTTGTGGGGAACATACCCTACGAGGCCACCGAGGAGA
AGCTAAAGGAGATTTTCAGCGAAGTGGGCCCGGTCTTGTCACTGAAACTG
GTCTTTGATCGGGAAAGTGGCAAACCCAAGGGCTTTGGCTTCTGCGAGTA
CAAGGACCAGGAGACGGCTTTAAGTGCCATGCGGAATCTGAATGGCTATG
AGATCGGCGGCAGAACACTGCGAGTGGACAACGCGTGTACGGAGAAGTCG
CGCATGGAGATGCAGCAGCTGCTTCAGGGACCCCAGGTGGAGAATCCCTA
TGGCGAGCCCTGCGAACCAGAGGATGCTCCCGAGCTCATCACCAAAACGG
TGGCTTCCTTGCCGCCGGAGCAAATGTACGAGCTGATGAAGCAGATGAAG
CTCTGCATCGTGAGCAATCCATCGGAGGCACGCCCGATGCTAATGCTCAA
TCCTCAGTTGGCATAC
FMO13854.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CstF-64-RA | 1446 | CG7697-RA | 88..594 | 10..516 | 2505 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18659905..18660274 | 147..516 | 1820 | 99.5 | Plus |
| 3R | 32079331 | 3R | 18659705..18659841 | 10..146 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:52:42 has no hits.
FMO13854.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:22 Download gff for
FMO13854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-64-RA | 306..820 | 2..516 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:51:09 Download gff for
FMO13854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CstF-64-RA | 80..594 | 2..516 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:51:09 Download gff for
FMO13854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18659697..18659841 | 2..146 | 97 | -> | Plus |
| 3R | 18659905..18660274 | 147..516 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:22 Download gff for
FMO13854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14485419..14485563 | 2..146 | 97 | -> | Plus |
| arm_3R | 14485627..14485996 | 147..516 | 99 | | Plus |
