FMO13857.5prime Sequence
624 bp (624 high quality bases) assembled on 2013-10-14
> FMO13857.5prime
TCAGTCGACATGAAGTGCACCATTTTATTGAGTTTTTTCAGCCTGATTTG
GTTTGCTGGTGGAATTAAAATTGATTGCGAGAATACGGAGGCCATTAACG
AGGACCACATCCACTATTGCTGCAAGCATCCCGATGGACACAATGATCTA
ATCGAAGGATGTGCCAGGGAGACCAATTTTACGCTGCCCAATCAAAACGA
GGAGGCACTGGTGGACATCACGGCGGACCGAGCCATCCGAGGCACTTGTT
TTGGCAAATGCGTCTTTAGCAAACTGAACCTGATGAAGGACAACAACCTG
GACATGGATGCCGTGAGAAGTTTGTTCACTGAAAGGTTTCCCGACGATCC
GGAATATGCCAAGGAAATGATCAACGCCTTTGATCATTGTCACGGCAAAA
GCGAAGAGAATACCTCCATGTTCCTGTCGAAGCCCCTCTTCAAGCAAATG
TCCAAGCAATTCTGCGATCCGAAGTCTAGTGTCGTCCTGGCCTGTGTCAT
CCGCCAGTTCTTCCACAACTGCCCGGCGGATCGCTGGTCGAAGACCAAGG
AGTGCGAGGATACCCTGGCCTTCAGCAAGAAGTGCCAGGACTCGCTGGCT
ACTTTGGCAAGCTTTCTAGACCAT
FMO13857.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp58c-RA | 691 | CG13524-RA | 19..615 | 10..606 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22706213..22706570 | 401..44 | 1760 | 99.4 | Minus |
| 2R | 25286936 | 2R | 22705948..22706157 | 606..397 | 1035 | 99.5 | Minus |
| 2R | 25286936 | 2R | 22706619..22706660 | 51..10 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:54:37 has no hits.
FMO13857.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:25:16 Download gff for
FMO13857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp58c-RA | 13..619 | 1..610 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:20 Download gff for
FMO13857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp58c-RA | 13..619 | 1..610 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:20 Download gff for
FMO13857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22705944..22706153 | 401..610 | 99 | <- | Minus |
| 2R | 22706214..22706562 | 52..400 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:25:16 Download gff for
FMO13857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18593449..18593658 | 401..610 | 99 | <- | Minus |
| arm_2R | 18593719..18594067 | 52..400 | 100 | <- | Minus |
