FMO13859.5prime Sequence
637 bp (615 high quality bases) assembled on 2013-10-14
> FMO13859.5prime
TCAGTCGACATGAAAGTGTGCTGGAATTTCTTTGCTGCGGCGGTGCTGTT
AGTGACGGTCACCTCGGGGCTGAGACCCCCACGATCCTACTATCGGAGGA
GCTACTTCAGTGCAGTGGGTTCAGGATCTGGGCACGCACCCAGCTCTCTG
CCAGGACCAGTGAGAATAGGACCCGCTAGTTACTTCCGTGCCGATCTGCA
AACAAATGAGAGCAAGCACCGGCCACTGAGCAAAAAGTATCCCAAGAAGA
GCCACTACAGACCCTACGGATCGCAAGAGGAAGAGGACGAACAACGCTAC
AATTCCGCGGAATATTCAGGAGAGTCCTCCGTTCAGGATAGTCGGGAATA
CACGATTGGCACCCAAATTCGCGTCCAGCATCCCATAACCGTGCCCAAGA
AGTCCAGTTCCGGCTACCAGAAGCAGCCAAAATATGTGACGGCCATTCCA
TACAAGGCATCTGGTTATGGATCCGATATCCACAAGCCCTCCGGTTATGG
ATCCGATGTTCATATTGGATCTGGAGAGGATGTTGGACCTCCTCCGAAAA
GATCCAAGAGGACCCCCAGTGCACACGAATCGTAAGCCGATCCCTTCCAT
CTAGTGCCCCCTCCAAAGGCACCCGCCACCTCCAGCA
FMO13859.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15545-RA | 1267 | CG15545-RA | 72..699 | 10..637 | 2975 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30871507..30871871 | 637..273 | 1615 | 96.2 | Minus |
| 3R | 32079331 | 3R | 30871954..30872199 | 273..28 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:54:43 has no hits.
FMO13859.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:25:18 Download gff for
FMO13859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15545-RA | 64..698 | 2..636 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:24 Download gff for
FMO13859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15545-RA | 64..698 | 2..636 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:24 Download gff for
FMO13859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30871508..30871870 | 274..636 | 97 | <- | Minus |
| 3R | 30871954..30872199 | 28..273 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:25:18 Download gff for
FMO13859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26697230..26697592 | 274..636 | 97 | <- | Minus |
| arm_3R | 26697676..26697921 | 28..273 | 100 | <- | Minus |
