FMO13864.5prime Sequence
1013 bp (889 high quality bases) assembled on 2013-10-14
> FMO13864.5prime
TCAGTCGACATGGACTACAGAGCGATGAATGAATCCTGCCAATGTCCACG
GTGTCGGTATGAACTTCGTTTGCCCAATCAGCCGATGCCCTGCCAAGAGA
AATGTTTCCCGGAGAAATATCTGATGTGTGGTTCGGATCTACGTCCTCGC
TGGCAGAACAGACCAGATCCTCGGGAAGTTTTTCAGAATTTTTCCCAAAG
AAATCCTCAAATACTTTCTCAGGAATCTGTTCAGAGTTGGAGTTTCCAGC
ATCCTCAAAACTGTTTCTGTGGACATCAACCTCCAATGCGAGCTCTGCCC
GACCATTCTCAGCAATTTTCCCAAGAATATTCTCAGCAGTGTTCGCAACA
ATCTCCTTGTGTTTCTCGTTGTGGCCAACAAAATCGACAGAACTGCTTTC
AGCCGCCTTGTCCAAACTGGACCAGACCATGTTGTTGCATAACCCACGAA
GTCGGCGTTCAAACGGACGAGATGGACGAATGCGAGCCCGAGTATATAGC
GATCACCGACATCACCACAAAGGAGATGAAGGTGAAGCATCGCACCGGAA
AGACGGAGACGATCATCGAAAAGGTTCAGTCGGTCACCCAGTTTCCCGTG
ACGGAAACTCAGCGCCTTGGGGAGAATGATTACGAACCAAAGTACGTCCA
AGACAAGGATGCAATTCCTTATCGAGCCATGAGGCATTCCGAGCTGGAGC
CCTTGCTGGTGTCGATGAGGGCGGAGGTGCCATAACTGAATCTAAAGATG
CAAAGGAGGAGATCGTCTACCAGGAATATGAGAGACGGAGCGCGATTTTG
ATGACCCTAAAGCCAAGGTAGAGAAGACCATCATCACTCAAATTCCGGTG
GACTCACCCGAAGCGAGATCGACTCAGCCCGCCAGTGGTAATACACCTCT
TCCGACTGCCAGCGAATTCACCTCTTTCCCAATTGCCTAGTGATAAATCA
CCTCCTTCCAACTGGCAGCGATATACCACCGGCATCCCACTGCCATGTAA
CACTCTTCCGAAT
FMO13864.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30416-RB | 1843 | CG30416-RB | 106..1109 | 10..994 | 4330 | 96.7 | Plus |
| CG30416-RC | 1852 | CG30416-RC | 106..1109 | 10..994 | 4330 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23322435..23323294 | 864..10 | 4060 | 99 | Minus |
Blast to na_te.dros performed 2014-11-28 23:52:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 3885..3926 | 250..209 | 111 | 73.8 | Minus |
FMO13864.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:25 Download gff for
FMO13864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30416-RC | 98..965 | 1..864 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:51:17 Download gff for
FMO13864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30416-RC | 98..965 | 1..864 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:51:17 Download gff for
FMO13864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23322435..23323302 | 1..864 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:25 Download gff for
FMO13864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19209958..19210825 | 1..864 | 98 | | Minus |
