FMO13874.5prime Sequence
1000 bp (911 high quality bases) assembled on 2013-10-14
> FMO13874.5prime
TCAGTCGACATGGAAAGTACAATAAGGTGGGGCCTTGCGTTCACCATTAA
GGAACGGCAACGTTTGGGCATCATGGGATTGATGCCCTGCTCCGTGCGCT
CCATGGATGACCAGATGAATGCGGCCCTGGCGAATTTTGAGGCGAGACCC
ACAGATATCGCCCGCTTTACATACTTGAGTGCTGTCCACCATCGACACCG
GCGACTGTACTACCGGTTCATCAAGGAGAACATCGAGAAATCGCTACCCA
TTGTTTATACACCAACGGTGGGCGATGTGGTGGCCACCTATGGACTGAAC
TTCCAGCAGGCCATCAGCCTGTTCATCAGCATTCACGACAAGGGCCACAT
CCGGGATCTTATGCACAACTGGGTGGACGAGGGCGTTAAGGCCATCTGTG
TGACGGATGGCGGAAGGGTACTGGGTCTCGGGGACATGGGTGCCAATGCG
ATGGGCATTAGTTTGGGCAAAATGATCCTATATACGGCTTTGGGTAGCAT
TCCGCCGAGCACACTAATGCCCGTTTGCCTCGACGTGGGTACCGATAATC
AGGCCCTGCTGCAGGATCCCCTTTATGTTGGGGCACGAATACCGCGGGTC
AAGGGACCGGAATACGATGAACTGGTGGATGAATTTATGGAGTCGGCGGT
TAAATGCTTCGGAAACAACACCTTCATCCACTTCGAGGACTTTGCCACTC
CAAATGCCTTGAAGTTCTTGGAAAAATACCAGTACAAGTACTGTTGCTTC
AACGATGATATTCAGGAACGGGAGCCACTGGCCTGCCGCGTTCATCAATG
TGGAACGCATCACTGCCGTAAATTGAGGACACCGTATTTCTCTTCGTAGA
GCTGGGAGTGCGGCATTGGGTATCGCATATGCTGCATGACTGAAGTACGC
GGCATTCCTGCCGAGAGCCACTAAAAATATCTTACTTGATGATGTCAATG
ATTTTGACACCGAGTCCTATCACGGGATGGGTGAAATTTTATAAAGGCTC
FMO13874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Menl-2-RD | 2127 | CG7969-RD | 185..1195 | 10..996 | 4415 | 97.1 | Plus |
| Menl-1-RD | 4198 | CG7964-RD | 2260..3266 | 10..996 | 4345 | 96.7 | Plus |
| Menl-2-RE | 4198 | CG7969-RE | 2260..3266 | 10..996 | 4345 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16416036..16416887 | 876..30 | 4010 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:53:10 has no hits.
FMO13874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:31 Download gff for
FMO13874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Menl-2-RD | 179..1158 | 1..966 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:51:33 Download gff for
FMO13874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Menl-2-RD | 179..1158 | 1..966 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:51:33 Download gff for
FMO13874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16415934..16416886 | 31..966 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:31 Download gff for
FMO13874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12303439..12304391 | 31..966 | 97 | <- | Minus |
