FMO13879.5prime Sequence
284 bp (284 high quality bases) assembled on 2013-10-14
> FMO13879.5prime
TCAGTCGACATGGTTTCCAAAAAGAGGAAAAATTCTGATGAAAATAAGAA
GAAGGTAGAAACCACATTTGAGTCCGATCCATATGAGATTAAATTTCCAT
TGCCGGAGCAACTCGATCCGTCCCAATGCCGCGATGAATTCATCGGCACA
TTCATCCGGGAGCACGAACTTCGGGCCAGTTCCCTGCGGCCCAGATCCAC
ATTCCGGGCCGCTTCGGAATTCAGGTCATCACAGGACCTCTCGGATCAGG
GGCCCGAAAAGGGGGCAGAGGCTATGGTGGTGCG
FMO13879.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst36Fb-RB | 1558 | CG42626-RB | 62..336 | 10..284 | 1375 | 100 | Plus |
| CG43339-RC | 1469 | CG43339-RC | 101..194 | 76..169 | 185 | 79.8 | Plus |
| CG43339-RB | 1426 | CG43339-RB | 101..194 | 76..169 | 185 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18674759..18675033 | 284..10 | 1375 | 100 | Minus |
| 2L | 23513712 | 2L | 18673092..18673185 | 169..76 | 185 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:53:33 has no hits.
FMO13879.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:41 Download gff for
FMO13879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst36Fb-RB | 62..336 | 10..284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:51:44 Download gff for
FMO13879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst36Fb-RB | 62..336 | 10..284 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:51:44 Download gff for
FMO13879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18674759..18675033 | 10..284 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:41 Download gff for
FMO13879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18674759..18675033 | 10..284 | 100 | | Minus |
