FMO13885.5prime Sequence
726 bp (726 high quality bases) assembled on 2013-10-14
> FMO13885.5prime
TCAGTCGACATGACAGACTTCAGCATTGCCAAGTTTAACAACTATCAGGA
GTATCTGCACTCCTTTACGACCGTCGAGGACTTTCGGTACTTACCTTTCC
ACAAAACGGTCATTACTCTCACAAAACTCGGCTATCGGGAACACCGCACT
TTCTACGAGGAGGATGAGTTCTTAAACGTGAAAAAGCAGGTGGAACAGCT
CCTGAATCCAACGGTTTCTGCCCAGATATACTACAGTCAGTACTTCAAGG
GAACCGATCCAGCACTTTGGGCATTGGCCGAACGCGAGCACGGGAATGTC
CAGCAGGAGATATCGACCATTATCTTTCTGGAAATAAGCGGACGAAGTGG
GTTCTCCAAGTCAGGCTACATTGACTTTGAGGCCAGTCTGCGAAACTACC
GGTTCAAGGGACCAAATGCAGTCGATTGGAAGGCGGTTTTCGAGGAGCGG
AAGTTGCTGAAGCCCCAGCCGAGTGATATAGTCTTCTACGACTGGAAGAC
CAGGAAGATTTTTGCGAATGACAACGACAATTATACGGTGGTAGCTCATC
CGGAACATGGTCTTATGTTTGCTCACAAGGGAGATCACAAGAACATACCC
GTTACCACCAAGAAGAACCCCTTTTCCAGCAACGTTAGACGCTCTATGAT
CAGGTCAAATCTATATGGTTTCATTATACTGTACGACCACCACGTTCGTA
AGAAGACTGCAAGCTTTCTAGACCAT
FMO13885.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8138-RA | 795 | CG8138-RA | 42..741 | 9..708 | 3500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13181707..13182100 | 315..708 | 1970 | 100 | Plus |
| 3R | 32079331 | 3R | 13181345..13181651 | 9..315 | 1535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:53:46 has no hits.
FMO13885.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:47 Download gff for
FMO13885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8138-RA | 38..747 | 1..716 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:51:53 Download gff for
FMO13885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8138-RA | 38..747 | 1..716 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:51:53 Download gff for
FMO13885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13181341..13181651 | 1..315 | 98 | -> | Plus |
| 3R | 13181708..13182106 | 316..716 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:47 Download gff for
FMO13885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9007063..9007373 | 1..315 | 98 | -> | Plus |
| arm_3R | 9007430..9007828 | 316..716 | 99 | | Plus |
