FMO13890.5prime Sequence
726 bp (726 high quality bases) assembled on 2013-10-14
> FMO13890.5prime
TCAGTCGACATGAGTATTTTGAGACTGGTGCTGCAATTCCTGCTCTTCAG
TTTGGTGCTGGTTTCGGGAAAGTTTCTCTATCACCGGAGCTACAAATACT
CCCCGGAGCTGATAGCCGAACTGAAAGACTTTGAGAAGCTGATTCCCACG
GTTACCATCGACGAAGTAGTCGCCGAGCATATGATTACGGATTCCGGATT
CCGTAAGGCCATTAAGTTTTTGCGCAGCTCCGATTTCAAGACGCTGCAGC
AGCGCATTGAGTCTCTGCCAGAAGTTGTGGATCTAATTAATTTCGTGCAC
CTCAATGATACGACCCAAGAAACAGTGGAGAAGTATTGGTATCGTAATAA
CACATATAACAGGCTTCGCAGGTCGGCTTATCTTAGGGAGCAGATTGTTT
TGGTGCTACTCGAATCGAGTTCAGAGTTCACACAGTTGAGTTCGTTCACC
AGTTTCGTGCGTGAAATACTAACGCATTTGCCCCGTGATCGATTTGTGGC
CCTGATCAATGAAAAGCGGCAGAAGAGTGCCTTGTTCGCCAAGTTCTATC
AGGCACTGAAAAGTGCAGAGTTCAAGGCGAAATCCGAAGCGGCATGGAAA
ACCAGCAATGTACAGAGCGTTGTTCAAGAACTTTCGCGACACGCAATCGA
TGCCCAGGATCTGAAAACCATAGGTTACGAAGTCATCTCTTGGGGTCCGA
ACACATTGGCAAGCTTTCTAGACCAT
FMO13890.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4398-RA | 822 | CG4398-RA | 70..768 | 10..708 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16432313..16432900 | 10..597 | 2940 | 100 | Plus |
| 2R | 25286936 | 2R | 16433018..16433129 | 597..708 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:54:01 has no hits.
FMO13890.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:56 Download gff for
FMO13890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4398-RA | 70..768 | 10..708 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:02 Download gff for
FMO13890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4398-RA | 70..768 | 10..708 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:02 Download gff for
FMO13890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16432313..16432900 | 10..597 | 100 | -> | Plus |
| 2R | 16433019..16433129 | 598..708 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:56 Download gff for
FMO13890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12319818..12320405 | 10..597 | 100 | -> | Plus |
| arm_2R | 12320524..12320634 | 598..708 | 100 | | Plus |
