FMO13893.5prime Sequence
363 bp (363 high quality bases) assembled on 2013-10-14
> FMO13893.5prime
TCAGTCGACATGTCCGTCCTGAAAGTATTCATCTTCGTCGCCCTCTTCGC
CGTGGCCTACTGCGCACCCAGTCCCGGCTTCTTTGGCAAACACGAGCACC
ACACCATCCACGTGCCCTACAAGGTGCACACGGTGCACCACCATCACGTT
CAGAAGGTCCATGTGCCGGTGGTGAAGCACGTGCCGGTGCCCATTTACAA
GGAGGTGCCCGTGCACCACGTCCACCACGAGGAGATCCCCGTGCCGGTGC
ACCACGTCCATCACGAGGAGATCCCGGTGCACCATGTCTTCGATGACCAC
CACGACCACCACGGCTGGAGCTCCCACCACGGACACGGCTGGCTGGCAAG
CTTTCTAGACCAT
FMO13893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14752-RA | 540 | CG14752-RA | 73..409 | 9..345 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8591565..8591817 | 93..345 | 1265 | 100 | Plus |
| 2R | 25286936 | 2R | 8591023..8591084 | 31..92 | 310 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader2 | 5124 | invader2 INVADER2 5124bp | 719..753 | 64..30 | 121 | 82.9 | Minus |
FMO13893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:25:00 Download gff for
FMO13893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14752-RA | 65..419 | 1..356 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:05 Download gff for
FMO13893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14752-RA | 65..419 | 1..356 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:05 Download gff for
FMO13893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8591023..8591084 | 31..92 | 100 | -> | Plus |
| 2R | 8591565..8591816 | 93..344 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:25:00 Download gff for
FMO13893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4478528..4478589 | 31..92 | 100 | -> | Plus |
| arm_2R | 4479070..4479321 | 93..344 | 100 | -> | Plus |
