FMO13903.5prime Sequence
483 bp (483 high quality bases) assembled on 2014-01-10
> FMO13903.5prime
TCAGTCGACATGTCACAACGGAACTTCAAGATGCCAAATCCGAACAACGA
ATCCCATTCCTATTTCCTCCGGAATATTCCGGAAGAATTGCAGCCTCAGT
TTACGCGTGGATTCAATCAGTGGATGGGCAATCAGTCTACGATGACTAAG
GGTTTGCCATCCAATACAGTGAATAAGTCTGCCCAGACGGCATCTGTCAA
TGATGGCAACTTGCAAGCTAGCGTGATCGCAATGCTGGCAGGAATGGACT
CGATCTTGGACATGGAGCAGCCTAACAGAAGTCCTTCGCGCGAAGAGCAC
GAGCGCCTAAATGAGCTGTTGTTCAGCAGCAATTTGCTCATGCTGGACGT
AAAGAAGCGAACGTTTCCCGTGGAGGACCCAACTGGGTATTTAACTTCGG
TTTCAGAGCAAAATCCAGATGGGAATCCGTTGGCTAAGCGACTAAAGCTA
GAGCGTCCTCAGGGCGCAAGCTTTCTAGACCAT
FMO13903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jb-RC | 591 | CG15460-RC | 38..494 | 9..465 | 2285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20390440..20390769 | 338..9 | 1650 | 100 | Minus |
| X | 23542271 | X | 20390257..20390383 | 465..339 | 635 | 100 | Minus |
| X | 23542271 | X | 20383872..20384063 | 200..9 | 600 | 87.5 | Minus |
| X | 23542271 | X | 20383583..20383698 | 466..351 | 295 | 83.6 | Minus |
| X | 23542271 | X | 20383805..20383868 | 312..249 | 185 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:00:10 has no hits.
FMO13903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:45 Download gff for
FMO13903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15460-RC | 36..501 | 5..472 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:34 Download gff for
FMO13903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jb-RC | 36..501 | 5..472 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:34 Download gff for
FMO13903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20390257..20390383 | 339..465 | 100 | <- | Minus |
| X | 20390440..20390771 | 5..338 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:45 Download gff for
FMO13903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20261284..20261410 | 339..465 | 100 | <- | Minus |
| arm_X | 20261467..20261798 | 5..338 | 99 | | Minus |
