FMO13904.5prime Sequence
339 bp (339 high quality bases) assembled on 2014-01-10
> FMO13904.5prime
TCAGTCGACATGTCGCAAAGCATGTTCCCAAAGCTGGCCGAGGATTACGC
GAAATTCAAGCGCTATGTGAAATGGCTGTACACCCTCTACGAACTGAACA
CACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAATGTCCTC
CTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCTTTGTGCC
GGGCTATTGTGTCACCGTCTTCCAGCTTTTATGGCCCCAAACGAGCGTGC
AAAATCTCACCAGCGTTTGCAGTACGAGTACGGAGGGCTTTTGCGGCAAC
GAAAGCGGATCAGTAATAACAGCAAGCTTTCTAGACCAT
FMO13904.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34194-RB | 655 | CG34194-RB | 298..610 | 9..321 | 1565 | 100 | Plus |
| CG34194-RA | 413 | CG34194-RA | 56..368 | 9..321 | 1565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17544822..17545000 | 143..321 | 895 | 100 | Plus |
| 2R | 25286936 | 2R | 17544487..17544620 | 9..142 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:00:13 has no hits.
FMO13904.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:46 Download gff for
FMO13904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34194-RA | 52..375 | 3..329 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:37 Download gff for
FMO13904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34194-RA | 52..375 | 3..329 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:37 Download gff for
FMO13904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17544483..17544620 | 3..142 | 97 | -> | Plus |
| 2R | 17544822..17545007 | 143..329 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:46 Download gff for
FMO13904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13431988..13432125 | 3..142 | 97 | -> | Plus |
| arm_2R | 13432327..13432512 | 143..329 | 98 | | Plus |
