FMO13906.5prime Sequence
429 bp (429 high quality bases) assembled on 2014-01-10
> FMO13906.5prime
TCAGTCGACATGCGACTTTTTCCAGTTTACTTTGCTATAATCTTCCTGTT
TCAATATGATGTCTACTCCATATCGGATAATTTGAAAACCGAACTGCGAT
CCTGGTTTGGAAATATAAAGCAACTGCACAATCCGGCAACGCTCAACACT
CTGAAAATGCTGTGCGTTGTGGAAGTGATGCGGGGCAGCAAACATCGGAT
AAATGTTGGCAATATTGACATTTTGAATAAGAATACTTTGGAAAACTTCA
TCAAGCTGCCGAGCTTTAAAATGCCGAACATCACAATTGTCATCGTGGAA
GACGAGTTGTCCAAGATTGCGAGAAGCGGGAGTCAGTATAAGGAACGGGA
AATGGAAAAGCTAGTTCAACATTTTAAGGAATGTATACTTGCAAAACTTA
AGGCACTATCTGCAAGCTTTCTAGACCAT
FMO13906.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1701-RB | 453 | CG1701-RB | 26..427 | 10..411 | 2010 | 100 | Plus |
| CG1701-RC | 952 | CG1701-RC | 26..427 | 10..411 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7408896..7409273 | 411..34 | 1890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:00:18 has no hits.
FMO13906.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:49 Download gff for
FMO13906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1701-RC | 16..432 | 1..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:40 Download gff for
FMO13906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1701-RC | 16..432 | 1..419 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:40 Download gff for
FMO13906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7408898..7409272 | 35..409 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:49 Download gff for
FMO13906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3296403..3296777 | 35..409 | 100 | <- | Minus |
