Clone FMO13907 Report

Search the DGRC for FMO13907

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:139
Well:7
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42591-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13907.5prime Sequence

504 bp (504 high quality bases) assembled on 2014-01-10

> FMO13907.5prime
TCAGTCGACATGGACATTCAGAAGAAAAATATGAAGTCACCTTCGAAGGA
TTCATCTGATTCCCCTGATGAAAAGCGCAAGTCCTTAGAAATCGTGCCCC
TATTAAAACCAGTTACCTTCAGTATTTCATACAGCTTTGGATTGAATTGG
TATTTGATCAACATGGAAGACTACATTCCTCGGAGAAAGAGGAGGTACTT
CATCAACCTATCGCTCTTCACCGATCAACTGCATACTTTCATCCAGAGCA
CTCTGCTCCTCCTAAAGCGCCCAAAATGGAGCACCATCTTTCTGGCCACA
ACACCTCATAGCTTCACGTACTATCAAGCCCACTTCCCGATGAAACCCAT
CCTGACATTCTCACCCATGATCAAGTCGACTTCGAAACTGGAATCTTGGA
AGATTAAGGTAAAAGCCGGACATCCGCCCATGATAAACAATTCTAGGCCA
TCAAGGTCAAGTTCAGTAGCAAGTCGGTCTCGCAAAGCAAGCTTTCTAGA
CCAT

FMO13907.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-RA 508 CG42591-RA 22..499 9..486 2375 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8069462..8069939 486..9 2375 99.8 Minus
Blast to na_te.dros performed on 2014-11-29 00:00:21 has no hits.

FMO13907.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:51 Download gff for FMO13907.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 22..505 9..494 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:41 Download gff for FMO13907.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 22..505 9..494 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:41 Download gff for FMO13907.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8069456..8069939 9..494 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:51 Download gff for FMO13907.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8062556..8063039 9..494 98   Minus