FMO13909.5prime Sequence
847 bp (847 high quality bases) assembled on 2014-01-10
> FMO13909.5prime
TCAGTCGACATGTGGTCTCGTAAGCTCCTTACTTTTCTGTTGACAATAAC
CACTTTACATCCAACAATCCAAGCCGCCTCCGTAGGCCAGGAATGTGGGA
TATTTAATGAGAAGCAGTACAATAGTGACAATATCATTGCGGAGCCTACC
GAACATCCTTGGGTTGTGCGGATCGTAGGAGTGACTAAGGATGGCAGCAA
CACATTGCTCTGCACTGGCATTCTTATCGATTCCAGACGCGTTGTGACCG
CAGCTCACTGTGTTTCAAAGGATGAATCGGAAAGCATTTATGGCGTTGTC
TTCGGGGATTCCGACTCTAGCAATATCAATCTTGTCAGCGCAGTCACTGT
CCATCCAGATTACTCACCTAGGAAATTCGAAAACGACTTGGCCATAATAG
AGCTGACCAAGGAGGTGGTGTTTTCAGACTTGGTTCAACCAATTTGCTTG
CCTTCAGTATCCGAAATGGTTCCAGGAAGTGAAACCTCCAATTCAAAGCT
TATCGTTGCCGGACTGGAGGGACCGTCATTCGACCGAAGGCATTCGGCAA
CTCAAAGGTTAGACAAACGCATTAAAATGACATACACTAAAATTGACAGC
AAGGAGTGCCATGAGAAGCAAGCCCGCTTTCCGGAGGAACTGATCTGTGG
CCACACCGAGAGGAGTCCTCTTTCAGGATCAGCTTTGACCGAGGCTTCGG
GTACTCCACGCCAATTTCATCTGTTGGGAATTGCGGTTGCTGGATTCTTC
TCGTCTGACCTAGATCACCAAGGTACTTAAACATTCGACCCCATCTAGAT
TGGATTTCGAAGAATTCTCAAAGTTAAGAGCAAGCTTTCTAGACCAT
FMO13909.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31205-RC | 1020 | CG31205-RC | 31..852 | 10..829 | 4060 | 99.8 | Plus |
| CG31205-RB | 917 | CG31205-RB | 31..852 | 10..829 | 4060 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20731773..20732539 | 65..829 | 3735 | 99.7 | Plus |
| 3R | 32079331 | 3R | 20731661..20731715 | 10..64 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:00:26 has no hits.
FMO13909.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:54 Download gff for
FMO13909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31205-RB | 23..855 | 1..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:45 Download gff for
FMO13909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31205-RB | 23..855 | 1..833 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:45 Download gff for
FMO13909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20731653..20731715 | 1..64 | 93 | -> | Plus |
| 3R | 20731773..20732542 | 65..833 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:54 Download gff for
FMO13909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16557375..16557437 | 1..64 | 93 | -> | Plus |
| arm_3R | 16557495..16558264 | 65..833 | 99 | | Plus |
