FMO13910.5prime Sequence
1048 bp (965 high quality bases) assembled on 2014-01-10
> FMO13910.5prime
TCAGTCGACATGATGCAAGTGCCCCTGCAACGCTGTTCGTGCGTCTTGGC
AGTTTTGGTGTTGCTCTGGAGTGGCGGATTAGCCCAGTTGCAAGTCCAGG
CTCAAAGTGGATACAACTATGGGCGTCCCGAGGTAGCCAATGTAGGAGGA
GCCACAGCTGGTGGTCGCTTGACACCTGCACCATATCCAACAGCACCAGC
CCTGCCACTTACTCCCGCTCCGGCTCCTACTGCATATGGAGCAGGCTTGT
TTCCCTCACCCGCTGTTGGATTTACGCCAAGTGGACAGGCTACCACTGCT
TTTGGAGCACCCGCCATTGTAGGAGCCACAAACCCCGTTAACCCACCGAG
AAGAACTTCATCTGGCGGATTATCTACCCCATCATCTCGCAGTGGACCCT
ATGGACCGCAGGCTTCGCAGTATGGAGGTACTCCCGGTGGATCTCCAATC
CGAGTTGCTAGTGGAACGGGAGACAGCGGGGACTACAACGATTCCGATGG
AGACTACTCGGCCATTCCGGGTGTTCCTGGAGTGGATTATCCTATTTATG
CCCAGGTGCCGCGCACCAACTTTGACTGTGCGCAACAGCCCCTACCCGGC
TATTATGCGGACATAGAGGCCCAATGCCAGGTGTTCCATATCTGTGCCCT
CAACCGGACCTACTCCTTCCTGTGTCCCAATGGCACAGTCTTCAGCCAGG
AGACATTAGTCTGTGTGTGGTGGAACCAGTACGACTGCGTTTCGGCGCCC
AGCTTATATGCGAACAATGCCTATATCTATGATTACTCCGAGAGAAGTGG
CTCCAATCTGAGAACATCGAATACCAACAACGTCTACCGTCCGGGCCGCT
TCTTCCTCGGCTGCCTTCGGGGCACTCTGGCCACGACTGGAACACTTTCG
AGCCACCGGATGTCTCAGTTGCTGGATATAACTCCCGCCGGGGTCCTACC
TTCAGCCACCCCACCCACCGCTCGTCCCAAGCCGGATGGGCCTGGGCTGT
CCTTCTCCCGCCATGTGTCCTAACACGGAACACTATACTGCCTCCGAG
FMO13910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14607-RB | 1472 | CG14607-RB | 101..1122 | 9..1020 | 4660 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7242724..7243570 | 98..943 | 3980 | 99.3 | Plus |
| 3R | 32079331 | 3R | 7242625..7242675 | 50..100 | 255 | 100 | Plus |
| 3R | 32079331 | 3R | 7241860..7241903 | 9..52 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:59:59 has no hits.
FMO13910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:37 Download gff for
FMO13910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14607-RB | 101..1129 | 9..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:27 Download gff for
FMO13910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14607-RB | 101..1129 | 9..1026 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:27 Download gff for
FMO13910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7241860..7241903 | 9..52 | 100 | -> | Plus |
| 3R | 7242628..7242674 | 53..99 | 100 | -> | Plus |
| 3R | 7242726..7243575 | 100..947 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:37 Download gff for
FMO13910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3068448..3069297 | 100..947 | 99 | -> | Plus |
| arm_3R | 3067582..3067625 | 9..52 | 100 | -> | Plus |
| arm_3R | 3068350..3068396 | 53..99 | 100 | -> | Plus |
