FMO13911.5prime Sequence
522 bp (522 high quality bases) assembled on 2014-01-10
> FMO13911.5prime
TCAGTCGACATGAAATTTTTTGTATTGCTAGTTTACATTTGCTTGGCTCT
CAAGTGCGGGCACCCGATAAACCTAAAAAATTACTATACTTCCACAACGC
CTTTCTCTTCAGCCGATCATGAAATTTCATTTCCGGCTTGCGCAAATTGT
TCAAGTGAAAAGAACTTTCGTACCAACACTGATTTTCATTGCCACTTCGA
AGATGACTCGGCCATTGAGGAAAATTTTGGAAAATGGACAAATAGTTATC
CGGACTGCCTGCCAGACCACTTTATTGCAACTCGGAAAATAAAAGCGTAT
TGCTGCTTTTGGTCACCGAAATTGGGATGCTCTGCGCTGATCGGAAGGAA
GTTCTACGATAAGAAAATATATAGCTGCAAGACTTGCAGACGATTTTGCA
GCGCAACTAAGCAAACCTATGTCGATGATTCGGATGGAAGTGATAAGGTC
TCGGAATCCTACGGATTCTCAGTTTTATTGGCCTTTCTGCTACTTAGCAT
ATACGCAAGCTTTCTAGACCAT
FMO13911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34258-RA | 623 | CG34258-RA | 13..507 | 10..504 | 2460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19951351..19951571 | 504..284 | 1090 | 99.5 | Minus |
| 3L | 28110227 | 3L | 19951625..19951798 | 284..111 | 870 | 100 | Minus |
| 3L | 28110227 | 3L | 19951854..19951956 | 112..10 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:00:01 has no hits.
FMO13911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:40 Download gff for
FMO13911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34258-RA | 6..507 | 1..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:28 Download gff for
FMO13911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34258-RA | 6..507 | 1..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:28 Download gff for
FMO13911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19951626..19951796 | 113..283 | 100 | <- | Minus |
| 3L | 19951854..19951962 | 1..112 | 96 | | Minus |
| 3L | 19951351..19951571 | 284..504 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:40 Download gff for
FMO13911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19944451..19944671 | 284..504 | 99 | <- | Minus |
| arm_3L | 19944726..19944896 | 113..283 | 100 | <- | Minus |
| arm_3L | 19944954..19945062 | 1..112 | 96 | | Minus |
