FMO13914.5prime Sequence
963 bp (963 high quality bases) assembled on 2014-01-10
> FMO13914.5prime
TCAGTCGACATGAGCTCGGTACGACCACTGAATGCCGCGCTGCAAGAGAT
TTGCATCAGGGAATTGAACGAGTTGCCCGCCCGTATGGCCCAGGACATTG
AGGCTCTGCGGGATTGGGTGCTGAAGCAGCCACATCTGCGGGCCTGCACC
GACGACCAGTTCCTGCTCGCCTTTCTGCGCGGCACCAAGTTCAGTCTGGA
GCGGGCCAAGGAGAAGTTCGATCGGTTCTACACGCTGCAACGATCCATTC
CCGAGGTATTCAATGAGCGGCGCTTAGCTACCGATCCCCAGGTGCTGGAT
ATCGTAAGAATGGGAGTACTCCTTCAAATTCCCATGGATGCAGACGATCC
GGGACCGCGGGTGACCATAATTCGCGCCGGTTCCTACGATACGAGCAAAC
ACAAGTTCCAGGACATCATTCGCGTGGGTTCCATGTTCGGTGAGATCATG
ATGTTCGAGGACGACAACGCCACGGTCAGTGGCTATGTGGAGATAATGGA
CATGGCTGGCGTTACGGGGAGCCATCTCTTTGCCCTCCAGCCGCAGTTGC
TCAGTAAGTTCTCCACATACGCGGATGAGGCGATGCCGACCCGCCAGAAG
GGCATACACTTCATCAATGTTCCTGCGGCCTTTGAAACTGGATTCAATTC
CCTGCGCTCCTTTTTCCCTGCCAAAATCAAGAGTCGGATCTCGGTGAGCT
CCGATCCGGCGGCCATATACGAGCTAGTGCGTCGCAAGTACTTGCCCCAA
GAATATGGAGGAACTGGTGGTAATCTGCAGGATATAAGCCACACCATGGA
AGCGAAATTGTCCAGCTATGGGCCCTACTTTCGCGAAAGCCAAAATTTCG
GTGCCAATGACAAGTTGCGCGAGTTTGGAGACCATAAGCGAGGGAATCAT
CGCTCTCCTTTGGCGCTGTGGGGTCGTTTCGGAAACTGAAAAAGACGCAA
GCTTTCAGACCAT
FMO13914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31636-RB | 1567 | CG31636-RB | 410..1348 | 5..942 | 4625 | 99.6 | Plus |
| CG31636-RA | 1294 | CG31636-RA | 137..1075 | 5..942 | 4625 | 99.6 | Plus |
| CG33965-RA | 1026 | CG33965-RA | 121..648 | 93..620 | 675 | 75.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6657003..6657376 | 687..314 | 1870 | 100 | Minus |
| 2L | 23513712 | 2L | 6657434..6657743 | 314..5 | 1535 | 99.7 | Minus |
| 2L | 23513712 | 2L | 6656678..6656934 | 942..687 | 1205 | 98.8 | Minus |
| 3L | 28110227 | 3L | 1233323..1233582 | 361..620 | 505 | 79.6 | Plus |
| 3L | 28110227 | 3L | 1233002..1233208 | 93..299 | 195 | 72.9 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:00:37 has no hits.
FMO13914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:19:59 Download gff for
FMO13914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31636-RA | 135..1083 | 1..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:54 Download gff for
FMO13914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31636-RA | 135..1083 | 1..950 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:54 Download gff for
FMO13914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6656669..6656933 | 688..950 | 97 | <- | Minus |
| 2L | 6657003..6657375 | 315..687 | 100 | <- | Minus |
| 2L | 6657434..6657745 | 1..314 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:19:59 Download gff for
FMO13914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6656669..6656933 | 688..950 | 97 | <- | Minus |
| arm_2L | 6657003..6657375 | 315..687 | 100 | <- | Minus |
| arm_2L | 6657434..6657745 | 1..314 | 99 | | Minus |
