FMO13915.5prime Sequence
983 bp (886 high quality bases) assembled on 2014-01-10
> FMO13915.5prime
TCAGTCGACATGCTTAAAAGCTGTCATTTAAACTACTGCTATGGCATTTT
GATTAGCCTTTTCATTTTCTGTGATACCGCTTCCGGCGATTTGATTAAGG
TCGACAAAACTATATTGGAGGATGCCAATCTGATCACGCCGGATTTGATC
AAGAAGTATGGTTATCCTGCTGAAACGCATAAGATCCAGGCCAAGGATGG
CTTCGTCCTTACGGCTCATCGGATTCCCAAGCCCGGAGGACAACCCGTGT
TATTGGTACATGGCCTGCTGGACAGCTCGGTGGCATATGTGATACTGGGT
CCCGAAAGATCCTTGGGCTTCCTGCTTAGCGATATGGGATACGATGTTTG
GTTGCTAAACACGCGGGGAAATAGGTATTCCCGGAAGCACAAGCGATATC
ATCGATACCAGCCGCAGTTCTGGGACTTCTCCTTCCATGAGCTCGGAGTG
TACGATCTTCCGGCGGCCATTGATTACGTTCTTGCAAGGAGCAAGGACTT
CGAACAGATCCACTATGTGGGCCACTCACAGGGAACTACATCCTTCTTTG
TGATGGGCAGTGAGAGATCGGCCTATATGAAAAAGATCAAACTTATGCAG
GCTCTGGCTCCGGTTGTCTTTTGGGACTACATCGATTCACCGATTATACT
CACTTTTGTGAAGTATTTGAGACCATTAGTGTTTATTGCCAGATCGTTTG
GAATATACGAATTTCCGCCGGAGAACGAAGTGTGGCGAAGCCTGATACAT
AAGATCTGCAGCTTCGTCTTCCAGATACCTGCACCTATTTCCTGATGGAA
GCCATGGGCGTGACTACGCACATTCAACTCCAGCCTCTTCCGCTCTCACG
GGACATGCATCCTCGATCATCGTAGTCTCTGAGCACTTATGGCCAGCAGA
TCCACAGCGGTGGATTTTTCAAGTACATACTAACGCACCTGGGAGATCGA
AGAAACACGCGTCGACACTCCGCCCAGGTACAA
FMO13915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18302-RA | 2144 | CG18302-RA | 652..1631 | 10..974 | 4465 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10535160..10535703 | 138..681 | 2720 | 100 | Plus |
| 2L | 23513712 | 2L | 10535766..10536074 | 681..974 | 790 | 91.3 | Plus |
| 2L | 23513712 | 2L | 10534973..10535101 | 10..138 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:00:40 has no hits.
FMO13915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:01 Download gff for
FMO13915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18302-RA | 643..1638 | 1..981 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:55 Download gff for
FMO13915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18302-RA | 643..1638 | 1..981 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:55 Download gff for
FMO13915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10534964..10535101 | 1..138 | 96 | -> | Plus |
| 2L | 10535161..10535703 | 139..681 | 100 | -> | Plus |
| 2L | 10535767..10536081 | 682..981 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:01 Download gff for
FMO13915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10534964..10535101 | 1..138 | 96 | -> | Plus |
| arm_2L | 10535161..10535703 | 139..681 | 100 | -> | Plus |
| arm_2L | 10535767..10536081 | 682..981 | 93 | | Plus |
