FMO13916.5prime Sequence
318 bp (318 high quality bases) assembled on 2014-01-10
> FMO13916.5prime
TCAGTCGACATGAAGAAGCATTTGGAAGTGTTCTTGGTCGTGGCATTAGC
TGCTCTAGCGGAATTGCCAGGAGTTACAGCCTCGTCCGTGGAAATACTGT
CCCATTGTGTCGCCTGTCCGGACGAATTTAGGGGCATGTTGGTCTGCGCC
TTTATCAACGGTTGCTACTTGGAAATAGAATACTGCTCCATGGTGGTCTT
CAACTGTGGACGCCAACAGCACCACAAACACTTGTTCCTAGTGGTAAACG
AGGGCAAGTGCAAGCCAGTTCGGGGCTACAAATGCGAGACCATGGATTTT
GCAAGCTTTCTAGACCAT
FMO13916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12828-RA | 448 | CG12828-RA | 41..331 | 10..300 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7149415..7149637 | 232..10 | 1115 | 100 | Minus |
| 2R | 25286936 | 2R | 7149291..7149358 | 300..233 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:00:43 has no hits.
FMO13916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:02 Download gff for
FMO13916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12828-RA | 34..339 | 1..311 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:56 Download gff for
FMO13916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12828-RA | 34..339 | 1..311 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:56 Download gff for
FMO13916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7149283..7149358 | 233..311 | 94 | <- | Minus |
| 2R | 7149415..7149644 | 1..232 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:02 Download gff for
FMO13916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3036788..3036863 | 233..311 | 94 | <- | Minus |
| arm_2R | 3036920..3037149 | 1..232 | 98 | | Minus |
