FMO13919.5prime Sequence
972 bp (894 high quality bases) assembled on 2014-01-10
> FMO13919.5prime
TCAGTCGACATGCAGTACTCCTATCTACTGGCAATCTGTGTCAGCTTGCT
GCTTCTGAAGCTGAAGGGAGCAGCTGCCACTTCTTTATCCGCCGAACCGA
CTCCGGAACTTTTGAATGCGGCCAAGCAAATAGGTTTAGATGAAGTTGGC
TTGCGAGAAATGTGGCACAGCCAGCAGCCGCTGGTTATCAGAACTCAAAA
CGATGCTGGTCAAGTCACCACTTTGACCTATGAGTTAGGTCCGGATTTCA
GATCGATTTTAAGACGCAAGGTCTCAGAGGGAATACTGCCTGCTAGGCTA
GAGGATAATTCAGGCTCTAAGCCCCAGCAAGATTGGGAGTATGTGCCGAG
TGCCGGTCGTCAGTTCCGTCCCATTGGAGATTCCAACTTCGGTACAGGTA
ATTTCGAGACAAAGATATTTAGCACTGAATTTCCGAGATTTCCGAATTGG
GAGCTGCCAGCGGGAGTTACTCCGAAAGTTACAACCAAGACGGAAACGGA
TAGCTCGGGACGCAAGGTGACCACCACAACTAGAACTTATAGCGGCATTC
TGGTCCCAGGCAGTAATGTATTCAAGCAGATATTCCCCGACATCTCCAGA
GAGCCTGGTCCAATTAACACAGACTCAAACCATCCAGCCGAGAATCCTAA
CACCTCAGTCTTTTCCCCATCTCGTTCCCCATCTACTGGACCTATTGATT
TCAACTATGTATATAATTCCCGACCAAGCCAAAGGGAACCCGTCTTTGTG
CCAGTGATTGACTCAACCACCACGCAGCGGGACTTCAGTTCCCCGGGTTC
AGTTCAGCATTACCCAGAGACGACGGGATCAGATCGAGTCATAGATGATT
ATTTGAAACAAGTGAATCTGATGCCTCAGAAATTTGAGAATTCGATGGTG
AGTGTCAGGACTATTGTGGATAAGATGCAGAATTCTACCTGCCGATTTGG
TCTAAGCTCAGTCTAGGGAACC
FMO13919.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-RC | 1337 | CG15293-RC | 197..1162 | 10..972 | 4485 | 98.2 | Plus |
| CG15293-RA | 1180 | CG15293-RA | 40..1005 | 10..972 | 4485 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14108232..14109142 | 972..65 | 3960 | 97.8 | Minus |
| 2L | 23513712 | 2L | 14109194..14109251 | 67..10 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:00:48 has no hits.
FMO13919.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:06 Download gff for
FMO13919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 43..1019 | 1..972 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:55:58 Download gff for
FMO13919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 29..1005 | 1..972 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:55:58 Download gff for
FMO13919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14108232..14109140 | 67..972 | 98 | <- | Minus |
| 2L | 14109195..14109257 | 1..66 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:06 Download gff for
FMO13919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14108232..14109140 | 67..972 | 98 | <- | Minus |
| arm_2L | 14109195..14109257 | 1..66 | 92 | | Minus |
