FMO13921.5prime Sequence
573 bp (573 high quality bases) assembled on 2014-01-10
> FMO13921.5prime
TCAGTCGACATGGTTTGGATTTGGAGCCTAATTGCACTCGGAATAGTTGT
TGGCGCAACGGGGGAGAATGGGAGTAAACCGAATACCACCGAACCGACAA
CGACGGCGCCATCCTCACGAACTCCTGAAACAACTACTGTGAGTCCCTAC
ACTGCACTCGATAAGACAATAACCGATGATCTTCAGAATATTCTAACCAC
ATATGAGCGTGAATGCATTGGTAATTCTGAGTTCACACGTAATCTTGACC
TCATACGCATCGCGGTAAAATGGGACCAGGGTCGTTTGAGAGAAAAGATA
GAAGCACGAAGAGACTTTGATGTGTACAATGAACAACGCATTTTAATTGA
ACGACAAATTGATGAGCGCATAGAGGCCCTCAATAATATCCTGCCTACCC
AGGAACCGAATAGTTATTGCTCAGAATTTTACTTGAAGCAAAGAGAAGCT
CTTAGGAATGCTAAATCACTTTCGAATCAAGATAAATCAAACACTTTAAT
AATTAACAAAGCAATTTGCACTATCAATGATAATTATAATGATTATTTTC
TTTACGCAAGCTTTCTAGACCAT
FMO13921.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43074-RA | 677 | CG43074-RA | 30..579 | 6..555 | 2750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3483930..3484380 | 555..105 | 2255 | 100 | Minus |
| 3L | 28110227 | 3L | 3484569..3484624 | 61..6 | 280 | 100 | Minus |
| 3L | 28110227 | 3L | 3484457..3484503 | 106..60 | 235 | 100 | Minus |
Blast to na_te.dros performed 2014-11-29 00:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 5562..5677 | 424..538 | 127 | 61.3 | Plus |
FMO13921.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:11 Download gff for
FMO13921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43074-RA | 24..582 | 1..559 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:03 Download gff for
FMO13921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43074-RA | 24..582 | 1..559 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:03 Download gff for
FMO13921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3483927..3484379 | 106..559 | 99 | <- | Minus |
| 3L | 3484458..3484502 | 61..105 | 100 | <- | Minus |
| 3L | 3484570..3484626 | 1..60 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:11 Download gff for
FMO13921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3483927..3484379 | 106..559 | 99 | <- | Minus |
| arm_3L | 3484458..3484502 | 61..105 | 100 | <- | Minus |
| arm_3L | 3484570..3484626 | 1..60 | 95 | | Minus |
