FMO13925.5prime Sequence
881 bp (881 high quality bases) assembled on 2014-01-10
> FMO13925.5prime
TCAGTCGACATGTCTATCAAATCCTTGACATACGTTGCGATCTTTGGCCT
TTTTTGGGGCTCAATTGCGGGAACTGTAGTTGATCAGTTTGGGATATATG
GTGGTTCACCGATTACCACCACGGAAAGGAGTAATGCGGAGTTGCGCTGC
ATGAACATCAATCCGCAGAACTCGGTGGACTTGGAGCAGATGATGGGACT
CTGGTACGGCAGCGAGATTATCGTGCACAGCCAAGATTTTCCGGGCACCT
ACGAGTACGACTCATGTGTCATCATTCATCTGACCGATGCCACGGATCAG
ATCCGTTTGAGCCAAGCAAATCGCGGCTATGGCTATGGAAATCAGGACTA
CAACCGTAACCAGAATAACTATGGACGCACCACCACCACTCAATCCTCCT
ATCCGGATAGCGATGAGTACCCGTTGAGATCGATTCAAAGCCAGCAGAAG
TACCTACGTTTGATTTGGAGTGAGCGTGATAACAATCTGGAGTATACTTT
CAACTATACCACCAGTGCACCTGGTCAGTGGTCCAACATCGGCGATCAGC
GGGGATCCTTGGTCACCCTGAACACGTACACCCAGTTCACGGGCACTGTC
CAGGTGGTGAAAGCGGTCAACGATCACCTGGTGCTGACCTTCTGCGGCAA
CGATGTTAAGAGCTCCATATACACAGTGGTTCTCACCCGCAATCGCCTTG
GTCTCAGTTTAGATGAGCTGCGTAGCATCAGAATCTGCTTTCCCGCCGTG
ACTCTACACGGAGACCATTCGCAAGGTTTGCAATGGATGTGGCGATTGGG
TGGCAGCCTCTTCGCTCTTTAGCCCTTTTGCTGGTCGTACGTTTGGCCTG
GGGGCGTGCCCAGCAAGCTTTCTTAGACCAT
FMO13925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32032-RA | 1072 | CG32032-RA | 76..937 | 6..863 | 4180 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9093790..9094207 | 298..715 | 2090 | 100 | Plus |
| 3L | 28110227 | 3L | 9093128..9093311 | 6..189 | 905 | 99.5 | Plus |
| 3L | 28110227 | 3L | 9093618..9093737 | 188..307 | 570 | 98.3 | Plus |
| 3L | 28110227 | 3L | 9094569..9094721 | 715..863 | 550 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:01:04 has no hits.
FMO13925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:18 Download gff for
FMO13925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32032-RA | 74..943 | 1..869 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:10 Download gff for
FMO13925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32032-RA | 74..943 | 1..869 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:10 Download gff for
FMO13925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9093126..9093311 | 1..189 | 97 | -> | Plus |
| 3L | 9093620..9093730 | 190..300 | 100 | -> | Plus |
| 3L | 9093793..9094206 | 301..714 | 100 | -> | Plus |
| 3L | 9094569..9094727 | 715..869 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:18 Download gff for
FMO13925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9086226..9086411 | 1..189 | 97 | -> | Plus |
| arm_3L | 9086720..9086830 | 190..300 | 100 | -> | Plus |
| arm_3L | 9086893..9087306 | 301..714 | 100 | -> | Plus |
| arm_3L | 9087669..9087827 | 715..869 | 95 | | Plus |
