FMO13927.5prime Sequence
399 bp (399 high quality bases) assembled on 2014-01-10
> FMO13927.5prime
TCAGTCGACATGTCGAGTGCAGTGCTGATAGCTTTCTGCGTCTTGGTTGT
TTTGACCGGACAATCGGTTGGCCAAAATGTGGCCGTGCAACAGTCAATTG
ATTGGGCCAATGAACAGTTCAAAATCGCTCAAGTTGTGGCCCAAGGAAAG
CTACCCAACAGTGTTGAGGCCCGGAACGATGCCAATGACCAATTGGACAC
TCTGAAATTGGCTTTATCCCATTGCGAGGCTGAGCTGAAATCCACCCAAG
GTGTCGATCTTCACAAGACTTGTGTTAAAGCCGTCTTCGCTGGCTTTTAT
ACTGCCTTGGATCGCTTGGCCGCGGAACACTGGCCCATTTATGGAGCCAC
CTCTGGTGCCGCCCGAATTGGCTTCTTCTGCGCAAGCTTTCTAGACCAT
FMO13927.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34284-RA | 520 | CG34284-RA | 27..398 | 10..381 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18902460..18902787 | 381..54 | 1640 | 100 | Minus |
| 3R | 32079331 | 3R | 18902863..18902907 | 54..10 | 225 | 100 | Minus |
Blast to na_te.dros performed 2014-11-29 00:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3240..3304 | 21..85 | 108 | 66.7 | Plus |
FMO13927.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:21 Download gff for
FMO13927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34284-RA | 21..403 | 2..389 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:14 Download gff for
FMO13927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34284-RA | 21..403 | 2..389 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:14 Download gff for
FMO13927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18902455..18902786 | 55..389 | 98 | <- | Minus |
| 3R | 18902863..18902913 | 2..54 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:21 Download gff for
FMO13927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14728177..14728508 | 55..389 | 98 | <- | Minus |
| arm_3R | 14728585..14728635 | 2..54 | 92 | | Minus |
