Clone FMO13930 Report

Search the DGRC for FMO13930

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:139
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42464-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13930.5prime Sequence

288 bp (288 high quality bases) assembled on 2014-01-10

> FMO13930.5prime
TCAGTCGACATGTTCATCAATATATGGTATTTATTCATAGCATTAGCTGG
TGTTAATGCGGAATCAGCAGATGAAATCTGTCAACTTACGCCTGAGGCTA
ATGGCTTTGGGAAAATTATGTCCTGTGCACACTACTCGAATTGGTTTTCC
TATCATTCAGATAAAAACGAATGTCTGGAGTTTTCATACGGAGGCTGTGG
TGGCAACGAAAATAGGTTTCAAACTAAAGCAATTTGCGAAGATCTCTGCA
AAAATAAAGTTGAGCAGCTTGCAAGCTTTCTAGACCAT

FMO13930.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG42464-RA 300 CG42464-RA 30..290 10..270 1305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3699619..3699816 73..270 990 100 Plus
2L 23513712 2L 3699493..3699556 10..73 320 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:01:17 has no hits.

FMO13930.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:26 Download gff for FMO13930.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42464-RA 30..294 10..274 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:21 Download gff for FMO13930.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42464-RA 30..294 10..274 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:21 Download gff for FMO13930.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3699493..3699556 10..73 100 -> Plus
2L 3699620..3699820 74..274 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:26 Download gff for FMO13930.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3699493..3699556 10..73 100 -> Plus
arm_2L 3699620..3699820 74..274 99   Plus