Clone FMO13931 Report

Search the DGRC for FMO13931

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:139
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13998-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13931.5prime Sequence

800 bp (799 high quality bases) assembled on 2014-01-10

> FMO13931.5prime
TGCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAA
TGAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGC
CCATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAG
ATTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCT
ATCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAA
TAGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAG
GCAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCC
TTACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTC
AAACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGG
AGACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTA
ACCTTTACTACCGCACTGCTGGCAGGAGGCGCATACATTATACGAAGTTA
TCAGTCGACATGGCTAAGACGATGACGTTCTGGTTTCTGGTCTTGGCTCT
GGTGACCTTAAATCCAACCTGGCCATTCTGGCGCACAGGGGCTGCCGAAG
TCACTTCCGCATCGATGTTCCAGTTTCTGGACCGCCACAATGGTGAAGGC
GACCACAGTTGGTCTCACCTACTGCCCACAAACTTCTACTCCGAAATGAA
CCAGCAGTACTACCGGAGATTCCCGGCGACAGGCTGGAAAATGGACACCT

FMO13931.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG13998-RA 331 CG13998-RA 15..255 560..800 1115 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5956565..5956805 800..560 1065 97.9 Minus
Blast to na_te.dros performed on 2014-11-29 00:01:19 has no hits.

FMO13931.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:28 Download gff for FMO13931.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13998-RA 9..255 551..800 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:22 Download gff for FMO13931.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13998-RA 9..255 551..800 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:56:22 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2014-01-10 11:20:28 has no hits.