FMO13945.5prime Sequence
1003 bp (908 high quality bases) assembled on 2014-01-10
> FMO13945.5prime
TCAGTCGACATGATTGGATATACGCTGCTGTTTCCGCTGGGATTATTGGC
CATTGCGCAGGCGCAAACGCTGAATGACACAGCAAGCGGTGCTCTGGCCG
TCGCTCAGGAGCCTGGCATGTGGCGCCAGGCCAGACGGAGGAGTGTCCTG
GCAGATAGCTGCGTCACCAATAGCGGCACCACCGGCACCTGTCTCACACG
CTTCAAGTGCATGCGGCAATCGGGCACAGTGAATGGATACTGCGGCACCT
ACGGCGTGTGCTGTGAAACCAACCTTCAAGTGGGCTCTTCTACGCGCCAG
AAGCGAACGATTATCAAAAATCCTGGCGTTTTATCCAGCGATTTGAATAC
CTACACCATCGAAGCCTTTAGCAGCAATGTGCAGCAATTGCGAATCGATT
TTGAGCAGTTCGTGATGCAGCAGCCGACGGATGTGGATGGAGTTCTCGAG
TGCCAGGACTACTTTGAGGCGGGCGGCTTCAAGTTGTGCGGAGTAAACGA
TGGCCAGCACCTGTACCTGCCCTTCAATGCGGCTGCGGGAGTCGATCAGG
TGACTCTAACGTTTGTAGTGACCTCCAGAGGAACAGCACCCGTGTGGAGG
TTGATCGTAACCCAGCTGGAAGGTCCACCAGCGAATAGCCGACGGCGTTC
GAGCACATCTACCGGCCTGGGAACCTCCACCAATTCTCTGCAGGATCTAA
GGGACATCTTTGCCTCGCACCACGCTGACTATGAGCTACTTGCGCCCGCC
CGGGCTGCCAACAATACTACACCGATCTGTCGGGCACCATTCGCAGCTTC
AACTTTCAGACTTCAGTGACCAGCAACTAAATGCCTGACTTGAGTTACAA
CATCTGCATCGATCAGCTACTTCCGCCAGCATGATCGATACTCCTTAACA
AGTTTTCAATGACGATGCAGTCGGAACTCGGGCGAGGACTACAACGAGTT
CTGCCACCCCCTGTCACCCACTTGGCCACACAGGACGTACACTCAGAGAA
CTC
FMO13945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17047-RB | 1914 | CG17047-RB | 661..1617 | 10..965 | 4475 | 98.2 | Plus |
| CG17047-RA | 1310 | CG17047-RA | 57..1013 | 10..965 | 4475 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13300201..13300819 | 269..888 | 2915 | 98.7 | Plus |
| 2R | 25286936 | 2R | 13299655..13299913 | 10..268 | 1295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:01:55 has no hits.
FMO13945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:48 Download gff for
FMO13945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17047-RA | 51..1018 | 3..971 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:43 Download gff for
FMO13945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17047-RA | 51..1018 | 3..971 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:43 Download gff for
FMO13945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13299649..13299913 | 3..268 | 98 | -> | Plus |
| 2R | 13300201..13300819 | 269..888 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:48 Download gff for
FMO13945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9187154..9187418 | 3..268 | 98 | -> | Plus |
| arm_2R | 9187706..9188324 | 269..888 | 99 | -> | Plus |
