Clone FMO13946 Report

Search the DGRC for FMO13946

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:139
Well:46
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15641-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13946.5prime Sequence

393 bp (393 high quality bases) assembled on 2014-01-10

> FMO13946.5prime
TCAGTCGACATGCGACGGCAAGGAGTGCATTGCTGCTGTCTGGTGGCCAT
CGCCCTGGCCATGGCCATACGCCAGGTGTCCATGGGCATCAGCGCCAGCG
ATCGCCGCTTCCAGTGCCTGCAGACGCGACTGATAGGCCAGGCCAACTGC
TCGCCATGCGCCGATCTGTACGTCTTCAATCGCCAATCCGCCTACCGGCG
CTGCGAGCACGTCAACGGTAATTGCTACCCACATCGCACGGTCTTCGCCA
GCGCCCGCATGTGCGAGCTCACCTGCCAGCCGTACATCCGGCGACCCACG
CTGCACGAGGTGACCACCCTGCCGCCGCCACCACCGATCGTCGAGCCCTT
CGGCGACAGCGATGAGGAGTTCGAGGCAAGCTTTCTAGACCAT

FMO13946.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15641-RA 413 CG15641-RA 16..381 10..375 1830 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15467906..15468271 10..375 1830 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:01:27 has no hits.

FMO13946.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:32 Download gff for FMO13946.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15641-RA 6..389 1..384 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:28 Download gff for FMO13946.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15641-RA 6..389 1..384 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:28 Download gff for FMO13946.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15467896..15468279 1..384 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:32 Download gff for FMO13946.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15361929..15362312 1..384 97   Plus