FMO13947.5prime Sequence
297 bp (297 high quality bases) assembled on 2014-01-10
> FMO13947.5prime
TCAGTCGACATGGCAAAGTTATTTTCCATCCTTTTGTGCCTGGCTATTAT
CGGATTCATCAGCGCAGCTCCTATAGAGGACAAGAAACCCGCTGAGGAGG
CTGATCTCTCCACCGCGGACTCCATTGGCTACGGCTACTATGCAGCTCCA
TCGCCAATTTACTACGGCGGCTATGGAGGTGGCTACAAGTACGGCGGATA
TTCCGGTTACGGCGGCTACGGCGGATATCGCTCCTACGGAGGCGGATTCT
ATCGTCCCCGAATTTACCCAGTTTGGGGAGCAAGCTTTCTAGACCAT
FMO13947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13177-RB | 1099 | CG13177-RB | 118..387 | 10..279 | 1350 | 100 | Plus |
| CG13177-RA | 639 | CG13177-RA | 118..387 | 10..279 | 1350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12163982..12164184 | 77..279 | 1015 | 100 | Plus |
| 2R | 25286936 | 2R | 12163860..12163922 | 17..79 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:01:29 has no hits.
FMO13947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:34 Download gff for
FMO13947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13177-RA | 109..390 | 1..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:30 Download gff for
FMO13947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13177-RA | 109..390 | 1..283 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:30 Download gff for
FMO13947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12163860..12163921 | 17..78 | 100 | -> | Plus |
| 2R | 12163984..12164187 | 79..283 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:34 Download gff for
FMO13947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8051365..8051426 | 17..78 | 100 | -> | Plus |
| arm_2R | 8051489..8051692 | 79..283 | 99 | | Plus |
