FMO13948.5prime Sequence
1073 bp (971 high quality bases) assembled on 2014-01-10
> FMO13948.5prime
TCAGTCGACATGCCAGCACGACGAAGTGAAAGGATTGCGGCACGTGGGGA
TGCTAATGGTAGCCCAACAAACGAGTCCAACACGGGACCTGTGGGAAGAG
TTCGCCGTGGTACGAACTCAAGGGACCAGTCCGATAGACCACGTGGTGGC
CGTGCAGCCCCCAGGGGCAGGCGAACTATTGTTCGTCCTGAAATTCGTTT
TTCGACACCGACAATGGACGAAAGACAACGTGCGAGAATCGAGGCTATGG
CTGCGATAGCTGCTGGTACAGATTCTGAGGATACTGAAGGATCTGCCGAA
GAAGTCCGCTCTCAATCATTCTTTGCTGTTTCTGTTTTTTTGACTGCCCG
ACTGGGAACTCCTGGTCGTCGAGCAACTAGTACACCAGCCGCTGTCCCGT
CACGTCGTGGCCGCAGGACGGTTTCAATTTCAGTAGCTACACCTTCGAAT
CCGCCTGTTCGGGCCACTGTAATACGCCAAGGTTCACAGATGCACCTAAC
CAGAGGTCTACCAACTGTGACTGAAAATGTGCCAATGGACGAAACTTTTG
ACACTGAGTCGTTGCAAAGCAACTCTCTGGTGCTAAGACTTTTTCGCATC
GAATCCGGAATACCCACCCAAGGTGATCCCCTCACCATCACTAGGCTCCG
TCGAGAGATCTCAGAGTTCTCAACCGATCAAACGGAAGGGTGTAAGGCGG
AGATGGTGGGCGACAATCTGTTCCACTGGGTAGCCACGATCCCAGGTCCC
TCGGAACAGTTTACGAAGTGGGCGTTTTAGAGTGAGATAGTCTTTCCCAG
GAACTATCCATTTTATCCCCCTATCTTGCGTTTTAACCAAGACTTACCAC
TGCAACATCGCTTTATCTGGGCGCATTTGCCTGGATATCTCGGCTCGAAG
TGTCGCCAGCTTTGTCGGTTCCAAGGTACTATATCATAATGTCATTGCTG
GCGACCGAATCCCACGATTCTAAGGAGGATCGTAGCGATGTTTCAGGGAA
TCGTGCCCTCTCAGACAAGATTGTCACGGAATGTGACCCAAATTGCCAAG
GCAGCTCTCTTACATTCTCTTGG
FMO13948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10862-RA | 1201 | CG10862-RA | 77..1127 | 10..1042 | 4595 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3653577..3654329 | 952..210 | 3265 | 98.7 | Minus |
| 3L | 28110227 | 3L | 3654436..3654636 | 210..10 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:01:32 has no hits.
FMO13948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:35 Download gff for
FMO13948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10862-RA | 77..1058 | 10..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:32 Download gff for
FMO13948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10862-RA | 77..1058 | 10..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:32 Download gff for
FMO13948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3653577..3654328 | 211..952 | 98 | <- | Minus |
| 3L | 3654436..3654642 | 2..210 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:35 Download gff for
FMO13948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3653577..3654328 | 211..952 | 98 | <- | Minus |
| arm_3L | 3654436..3654642 | 2..210 | 98 | | Minus |
