FMO13951.5prime Sequence
579 bp (579 high quality bases) assembled on 2014-01-10
> FMO13951.5prime
TCAGTCGACATGACCAACTTGATATGCGTTTCCTTAGCTGGATTACTCCA
CGTGATCCAGTTCCTGGCGTTTTATTCCAGAAGTGCCAATACTCCGGCAC
CGAAACTACCCTCGCTATTTGTGGGTCTTGCTGCGATGGATATTATATGG
GACAATTGCTTCGTTCCCCGGAAACTTCAAAAGAGGTCGGCTGTGATCAG
GTGGATATACGAATTGATAGTGTCACACTTGCTATTGGGGCTTGTCCAGG
TGTTTTGGAAGCCAGTGGATAATATATGTGTCATCCTGATGAGACTCATA
ATACTCGGCACTGGCATCGTCTCGGAGACCAACTATGAAAACTACGAAAG
CTACTGGGTGGGCTTTCTTACCGTGCCGTTGTCCCTTCTGATCCTAGCAA
TAGCCGGCCAAGCCACTGACCATTTCTCCGTGTTACGCGCTTACAAAATG
CAAAATGTGGGGGCCTTAAAGTATCCGACGAAGAGGCTGCCGCATCGTTC
CGATTCTGAGAGAGCACAGGGATCAGGCACGCCGACGGCGTCAGCAATAA
AGGGAAACTTGGCAAGCTTTCTAGACCAT
FMO13951.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43115-RA | 688 | CG43115-RA | 75..626 | 10..561 | 2745 | 99.8 | Plus |
| CG43136-RA | 704 | CG43136-RA | 75..525 | 10..460 | 1970 | 95.8 | Plus |
| CG43136-RA | 704 | CG43136-RA | 574..664 | 473..561 | 370 | 94.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6065791..6066342 | 561..10 | 2745 | 99.8 | Minus |
| X | 23542271 | X | 5853835..5854285 | 10..460 | 1970 | 95.8 | Plus |
| 2L | 23513712 | 2L | 6972258..6972395 | 25..167 | 410 | 87.4 | Plus |
| 2L | 23513712 | 2L | 6972418..6972605 | 211..395 | 380 | 81.4 | Plus |
| X | 23542271 | X | 5854334..5854424 | 473..561 | 345 | 94.5 | Plus |
| 2L | 23513712 | 2L | 6972732..6972805 | 488..561 | 235 | 87.8 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:02:10 has no hits.
FMO13951.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:56 Download gff for
FMO13951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43115-RA | 64..626 | 1..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:52 Download gff for
FMO13951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43115-RA | 64..626 | 1..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:52 Download gff for
FMO13951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6065791..6066352 | 1..561 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:56 Download gff for
FMO13951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5959824..5960385 | 1..561 | 99 | | Minus |
