FMO13958.5prime Sequence
993 bp (929 high quality bases) assembled on 2014-01-10
> FMO13958.5prime
TCAGTCGACATGTTCAAACTGGAGTCCTACATCACTCCGATTCTGCTGAG
CTACGTGGCCAAGTACGTGAAGAACTTCCGCGACGAGGATGCCCAAGTGT
CGCTGTGGGAAGGCGAGGTCACCTTCCAGAATCTGGACCTGCGCCTGGAG
GTGCTCGAGGAAGAGCTGAACCTCCCAGTAGAACTAGTTTCCGGCCACAT
TCATGAACTCAGCATCCTGGTGCCGTGGACCAAGCTTATGTCCGAGCCCG
TGAAGATCGTCATCAATACCATAGAATTCGTGGCCAAGTTGCCGGATAGT
GAGAGCAAGCAGCGCAGGGCCTCCTTCCAGCGGGAGCAGCGAAGGAAATC
GAAGCGGGAGTCCGTGGAGCAGCCGGATCAGACGAAGAGTCCTGGACCGG
CAAGCTCTTCCAGCGTGGTCAACAAAATCATCAACAACATCAACCTGCAG
TGCCACAACATCATCCTGAAGTATGTGGAGGACGACATCGTGGTCTCTAT
GAATGTGCAGACCCTTAACTTTAGCTCCGCCGGCGAGGACTGGAAGCCCA
CTATGGTGGACATACACCCGGTGTCCGTCGTCATGCGCAAGTTGCTCCAG
GTCTCAGATTTGACCATCTGCTTGGACAAGCGCAACACAGCTGGTAGGAT
AGAGGTGTGCCAGGAGCCGGTTCTCTACCGATGTACTCTGGAGTGCCGGG
TTCTCCGCAAGTACAACGCCAACACGGTGTCCACAACAAGCACAACACGC
ATTGAGTTTTCACGAAGTCGCTGGATATCAACGTGTCATCTCTGCAGTTC
CCCATGGTGATGAGGCTGGTCAAATTGCTGCTCGAGCTTAGCCAGCCGAG
TTTGAGGATGACCCCAGAATCCAGAAGATCAGGAGCGGTAGCTGAGGCAG
CGAGTCGAACAGGGGACGATCCGCAGACGATCGTCTTTAGTGGACTGACC
TATGCCCATTCGAATCTGAGGCCTTCTCGCCTGGCGACCTCCA
FMO13958.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15523-RB | 2309 | CG15523-RB | 196..1135 | 9..938 | 4420 | 98.7 | Plus |
| CG15523-RA | 11469 | CG15523-RA | 196..1135 | 9..938 | 4420 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29936173..29937087 | 9..917 | 4260 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-29 00:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6486..6531 | 371..416 | 113 | 71.7 | Plus |
FMO13958.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:20:49 Download gff for
FMO13958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15523-RA | 191..1126 | 2..930 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:56:44 Download gff for
FMO13958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15523-RA | 191..1126 | 2..930 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:56:44 Download gff for
FMO13958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29936168..29937103 | 2..930 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:20:49 Download gff for
FMO13958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25761890..25762825 | 2..930 | 98 | | Plus |
