FMO13963.5prime Sequence
951 bp (933 high quality bases) assembled on 2014-01-10
> FMO13963.5prime
TCAGTCGACATGAGCAGAGTTAGGCAGCTCCACAATCACATCTGGAATAA
TCAGAACTTTGATAAAGTGAAATCGGTTATGGACTGGTTACTAGCAACTC
CGCAGTTGTACAGCGCGTTCTCCTCCTTGGGTTGCTTGGAGGGCGATACC
TATGTGGTCAACCCGAATGCATTGGCCATTCTGGAGGAGATCAACTACAA
GCTCACCTATGAGGACCAAACACTGCGCACCTTTCGACGGGCCATTGGAT
TTGGCCAGAATGTGAGGTCAGACCTGATACCGCTGCTGGAGAATGCCAAG
GATGATGCGGTCCTGGAGTCGGTCATCCGGATACTCGTCAATCTGACGGT
GCCGGTGGAGTGCCTCTTCTCCGTGGACGTGATGTACCGCACGGATGTGG
GTCGCCACACCATCTTCGAGCTGAACAAGCTGCTGTACACCAGCAAGGAA
GCATTTACCGAGGCCAGGAGCACCAAGAGCGTGGTGGAGTACATGAAACA
CATACTGGAGTCGGACCCTAAGCTGTCGCCGCACAAATGCGATCAAATCA
ACAACTGTCTGCTGCTGCTGAGAAATATCCTGCACATTCCAGAGACGCAT
GCCCATTGCGTGATGCCCATGATGCAGTCGATGCCGCATGGCATCTCCAT
GCAGAACACGATCTTGTGGAATCTCTTCATCCAGAGCATCGACAGTTACT
CCTGTATCTGATGACCTGTCCGCAGAGAGCCTTCTGGGGAGTGACCATGG
TGCAACTGATTGCTTTGATCTACAGGATCAGCATGTGAGCACTCTGCAAA
ACTACTTAGCCTCTGGTTCGAAGCCTCTCTGTCGGAAAGCTCTGAGGATA
ATGAGAGTATACCTCGCCCCCCAAACAGGCAGTGGCGATCCAGCCCATGC
TGACCTCTGATCTACTCTGAATTCTCGGAAAATGTAGCAATGGCCGTGGC
A
FMO13963.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tim-RP | 5404 | CG3234-RP | 597..1557 | 2..951 | 4455 | 98.3 | Plus |
| tim-RO | 3525 | CG3234-RO | 652..1612 | 2..951 | 4455 | 98.3 | Plus |
| tim-RN | 3136 | CG3234-RN | 266..1226 | 2..951 | 4455 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3503514..3504300 | 951..175 | 3365 | 97.8 | Minus |
| 2L | 23513712 | 2L | 3504361..3504526 | 175..10 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:02:44 has no hits.
FMO13963.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:15 Download gff for
FMO13963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tim-RO | 686..1646 | 1..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:12 Download gff for
FMO13963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tim-RN | 265..1225 | 1..950 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:12 Download gff for
FMO13963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3503515..3504299 | 176..950 | 98 | <- | Minus |
| 2L | 3504361..3504535 | 1..175 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:15 Download gff for
FMO13963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3503515..3504299 | 176..950 | 98 | <- | Minus |
| arm_2L | 3504361..3504535 | 1..175 | 98 | | Minus |
