FMO13965.5prime Sequence
952 bp (889 high quality bases) assembled on 2014-01-10
> FMO13965.5prime
TCAGTCGACATGGGCACGCGGGAGCGCGAAAGGGAGTGCCGCCTGTGCGC
GGTCACCTTCTTCGCGAAACTGCATCCCGGCGACGTGTGCGGCAGCAACG
GCCTGCCCCTAACGCCCAACTCGATTGCGATCCTGGGGCGTGCCCAGAAA
CTGAAGGAGCTGCAGGACGAGCACCTGTGCCAGTACCTGGATGTGATCCG
CGGCAAACACGAGCGCACCATTGTGGTTTCGGAGTATCTGGGACTCTCAC
TGGAGGACTACGCCATGCGTCATCCACCGCTGGCCATTGCCCAGATACTG
AGAATCTTCTACCAGGTGGCGTGCGGCATCAATGTGCTGAGTCGACACCA
TCTGGTGGCCCACAACGTGGAGCCCAAGCACATTCTACTCTCCAGCGATG
GGCAGCGGGTGAAGCTCTTCAACTACGGGCTGCATCACATGACCAAGGGC
GGTGCCTATGTGCCCTTTCCCATTGGCAACATTCGCTACATGGCACCCGA
ACGACTGCTCGGTCTGAATGGCAATGTGAAGAGCGACGTTTGGTCGCTGG
CCCTGGTAATGGTGGAGCTAATATTGCAGATCGAGCTGTGGCCGAAGCTC
AAGCTCTCGAATGTGGTTAGAAAGATCCTGGCCTTTGGCAAGAGCAACGG
GGCGTTGGAGAAGATTGCGCGAGAGCACCAGTGTCACGAGCGCTATGTGC
AGATGGATCAGCGCCTGCGACAGCTGCTGGAGAGCTGTTTAAGTGTACTG
CCCAAGAGGAGACCACTGCCAGGTGAGCTCTTGGAACATCCCATTTTCGA
GGAAGTCCTATTGGATTTGAAGAAACAGAGATGCTCCCCTGAGCCCAGAA
CCGAACATTTACCGCTGCTGCTGGATTCCCTGTCGCAGATCTACACCTGT
GCCACTGGCCCGGGAAAATGTGCCACTGGACCCAAAAAGGAGGGCCCCTT
CC
FMO13965.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4041-RB | 2723 | CG4041-RB | 125..1071 | 9..946 | 4315 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4917257..4917922 | 873..211 | 3150 | 99.2 | Minus |
| X | 23542271 | X | 4918121..4918323 | 211..9 | 1015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:02:47 has no hits.
FMO13965.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:17 Download gff for
FMO13965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4041-RB | 118..1077 | 1..952 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:14 Download gff for
FMO13965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4041-RB | 118..1077 | 1..952 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:14 Download gff for
FMO13965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4917172..4917921 | 212..952 | 96 | <- | Minus |
| X | 4918121..4918330 | 1..211 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:17 Download gff for
FMO13965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4811205..4811954 | 212..952 | 96 | <- | Minus |
| arm_X | 4812154..4812363 | 1..211 | 98 | | Minus |
