FMO13970.5prime Sequence
1028 bp (955 high quality bases) assembled on 2014-01-10
> FMO13970.5prime
TCAGTCGACATGGCGGAATATTTGCAGCCTGGAGTCATCCGGAAGCTGGA
CGAGGTGGTGGTGAACCGCATAGCCGCCGGCGAGATTATTCAGCGACCCG
CCAACGCCCTAAAAGAGCTGCTCGAGAACAGTTTGGACGCCCAATCGACC
CACATCCAGGTGCAGGTGAAGGCCGGTGGGCTGAAGCTGCTTCAAATCCA
GGACAATGGCACGGGGATACGACGCGAGGATCTGGCCATCGTCTGCGAGC
GGTTCACCACCTCCAAGCTGACCCGCTTCGAGGATTTGTCCCAGATAGCA
ACATTTGGCTTCAGAGGAGAGGCCTTGGCCAGCATTAGTCATGTGGCGCA
CCTAAGCATCCAGACCAAGACGGCTAAGGAGAAGTGCGGCTACAAGGCCA
CCTACGCGGATGGCAAGCTCCAGGGTCAGCCGAAGCCGTGTGCCGGAAAC
CAAGGCACGATCATTTGCATAGAGGATCTGTTCTACAACATGCCGCAAAG
GAGGCAGGCACTCCGTTCGCCGGCCGAGGAGTTCCAGAGATTGTCCGAGG
TTCTGGCTAGGTACGCTGTCCACAATCCAAGGGTGGGCTTCACTCTCCGC
AAGCAGGGAGACGCGCAACCTGCCCTGCGGACACCAGTGGCCAGTTCCCG
ATCCGAAAACATCCGCATCATTTACGGGGCAGCAATTTCCAAGGAGCTGC
TGGAGTTTAGCCACCGCGATGAGGTTTACAAGTTCGAGGCCGAGTGTCTG
ATCACTCAGTTAACTATTCGGCCAAAAGTGTCAGATGCTGCTGTTCATCA
ACCAGCGACTGTGGAGTCCACAGCTCTCAGACCTCCGTGGACTCGATTTA
TGCACATACCTGCCCGTGCCACCATCCTTTCGTAAATATGAGCCTGACGC
TGCCGCCACAGACCTGGAACGTGAATGTCATCCCACCAGCATGAAGTGCC
TTTCTCTACAGGGAAAGATTGTGAAGCATAACAGCAGTTGAATCCGACTC
TAAGGCGCAATGCCGAGGAGTTCTAAAC
FMO13970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlh1-RA | 2071 | CG11482-RA | 19..1056 | 9..1025 | 4525 | 97 | Plus |
| Mlh1-RB | 2068 | CG11482-RB | 19..1053 | 9..1025 | 4475 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8170292..8171109 | 9..823 | 3940 | 99.6 | Plus |
| 2R | 25286936 | 2R | 8171174..8171276 | 830..929 | 310 | 91.3 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:02:27 has no hits.
FMO13970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:05 Download gff for
FMO13970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlh1-RA | 13..1002 | 1..979 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:02 Download gff for
FMO13970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlh1-RA | 13..1002 | 1..979 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:02 Download gff for
FMO13970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8170286..8171109 | 1..823 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:05 Download gff for
FMO13970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4057791..4058614 | 1..823 | 99 | -> | Plus |
