FMO13974.5prime Sequence
1076 bp (878 high quality bases) assembled on 2014-01-10
> FMO13974.5prime
TCAGTCGACATGTATTTGACAGCCTTTCCCTTTTGGCCATTGGTATGCTT
CGTGTGGCTCTGTCTCGGTCTCGGCGACTTGACAAAAACTGCTGTGAAAC
GTAACGCGCCCCACTATGGAATTCACCCGACAAACGCACTGGGTCGTTGG
GATTGGAATAAGCACAAGCAGCTGCACTCGGATGCCAGAATCGGACATTT
AGAGGCGGGCAACGAGTCGCGGGAGGATCAGCTGTCGGAGGAGCTGAGCA
AGTTCGGCGAGAAACTCTTTCCCGTCTCCAACTATCCGCCGTATCAGCAG
AATAACGAGGATAGCCAGGAGGTGCATCATAGTGGAGAGGGAAGATTGCA
TACGATGGAATCGTCTGTGCCATCCAAGACTAGAATATCCGGTGGCACAA
ATTCAAACGATACTCCCAAGTTCCGGAACATTGGCGCCCAGAGGGGTAGA
ACCGAAATAGCCGGCATTCGCGAAACTGATCGAATCAGTTCACGTGGTCG
AGATGGTTTTATAGGTGGTCCGAGTAACAAACAGAAGCCATTTAGAGTCA
ATCTGGCCGTTCTGGTGCAGGACGATCCCAGTCAACCGGGTGAGACATAC
TCCAATTGCCAGAACTCCAATGAATCCCGACGAGAACTGCAATCCCGAGG
AGGATGCAGTGCCGAATTTGCAAAGGGATTGCGAGAAGACCCGGGATACA
TGTGATGTGCCCGCGAACCTTTCGATGCATTAGCAAAGTATTGGGCTCTG
CGATGGAGATGATGACTGCGGTGACTACTCGGATTGAGACGCACTGCCGG
AGCCAGGACGAATTGTACAGATGATCAGTTCGAGTGTCTCAACGGATTCT
GTTATTCCACGAACCCTGGGTATGCGATGCCAACACCGATTGCAAGGACT
TCTCGACGGAGACCCCCTGCAATCGCACCACCTGCACGGATGAACACTTT
CACATGCAACGATGGCTTATTGCATCTCTCCCTGGTCTTTCGATTGGATA
GGGTGACACCGATTGCCATGAACAACTTCGGATGAACTCAGTGGCCCGGC
GGCTCATAAACAAGCTGGACCAGAAG
FMO13974.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8909-RC | 7442 | CG8909-RC | 281..1319 | 7..1062 | 4530 | 96.6 | Plus |
| CG8909-RD | 7168 | CG8909-RD | 450..1488 | 7..1062 | 4530 | 96.6 | Plus |
| CG8909-RB | 7002 | CG8909-RB | 281..1319 | 7..1062 | 4530 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15912779..15913685 | 62..978 | 3920 | 97.7 | Plus |
| X | 23542271 | X | 15912069..15912125 | 7..63 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:12 has no hits.
FMO13974.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:31 Download gff for
FMO13974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8909-RB | 277..1263 | 1..1002 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:30 Download gff for
FMO13974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8909-RB | 277..1263 | 1..1002 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:30 Download gff for
FMO13974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15912065..15912123 | 1..61 | 95 | -> | Plus |
| X | 15912779..15913706 | 62..1002 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:31 Download gff for
FMO13974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15806098..15806156 | 1..61 | 95 | -> | Plus |
| arm_X | 15806812..15807739 | 62..1002 | 97 | | Plus |
