FMO13976.5prime Sequence
1037 bp (950 high quality bases) assembled on 2014-01-10
> FMO13976.5prime
TCAGTCGACATGACAAGTGATGGTGCTGTTACGTTTTGGATATTTTTGCT
TTGTTTAATCGCCTCGCCGCACCTGCAAGGGGGCGTGGCCGGGAGGCCCG
ATGAACTGCACATCGGCGGCATCTTTCCGATAGCCGGCAAAGGAGGATGG
CAGGGCGGCCAGGCGTGTATGCCTGCCGCAAGACTGGCGTTGGATGATGT
CAACAAGCAGCCAAATCTGCTGCCGGGCTTCAAGCTCATCCTGCACAGCA
ACGACAGTGAGTGTGAGCCCGGTTTGGGCGCCAGCGTGATGTACAATCTG
CTCTATAATAAACCGCAAAAGCTGATGCTGTTGGCAGGATGCAGCACGGT
CTGCACCACTGTAGCCGAGGCTGCCAAAATGTGGAATCTAATTGTGCTCT
GCTACGGGGCCTCGAGTCCGGCTCTTTCGGATCGCAAACGATTCCCCACT
CTATTCCGCACCCATCCATCGGCCACGGTGCACAATCCAACGCGCATCAA
GCTGATGAAGAAATTCGGCTGGTCCCGGGTGGCCATTCTGCAGCAGGCGG
AGGAGGTCTTTATATCGACCGTAGAGGATCTCGAGAATCGATGCATGGAG
GCTGGCGTTGAAATCGTAACTAGACAATCATTTCTATCCGATCCAACAGA
CGCCGTGCGCAATTTGCGACGCCAGGATGCACGCATCATTGTGGGACTCT
TCTATGTGGTGGCCGCCAGGAGGGTGCTCTGCGAAATGTACAAACAGCAG
CTATATGGCCGAGCTCATGTGTGGTTCTTTATTGGCTGGTACGAGGACAA
CTGGTACGAGTGAATCTGAAGCAGAGGGCATCACCTGCACTGTTGACAGA
TGCGAATAGCTGCCGAAGACATCTGACACGGAGCGCTCATGTGAATCAGA
CATCAGACACTATATCGGATGACTGCGAGATTTCGACATCGACTGATCAG
GCGCTATGAGAGTACGACTAACCCCGATCGCTATCCGAGGATATCAGGAG
GCCCCTCGCCTACAATGCCATGTGGAGTGGCTTGCCT
FMO13976.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R1-RC | 5642 | CG15274-RC | 1070..2117 | 10..1029 | 4520 | 96.9 | Plus |
| GABA-B-R1-RB | 4922 | CG15274-RB | 1070..2117 | 10..1029 | 4520 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15021095..15021346 | 10..261 | 1260 | 100 | Plus |
| 2L | 23513712 | 2L | 15025846..15026064 | 567..785 | 1095 | 100 | Plus |
| 2L | 23513712 | 2L | 15025614..15025785 | 396..567 | 860 | 100 | Plus |
| 2L | 23513712 | 2L | 15025388..15025524 | 260..396 | 685 | 100 | Plus |
| 2L | 23513712 | 2L | 15026155..15026253 | 784..878 | 295 | 96 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:18 has no hits.
FMO13976.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:34 Download gff for
FMO13976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R1-RB | 1063..2123 | 2..1033 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:35 Download gff for
FMO13976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R1-RB | 1063..2123 | 2..1033 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:35 Download gff for
FMO13976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15025847..15026063 | 568..784 | 100 | -> | Plus |
| 2L | 15021087..15021346 | 1..261 | 98 | -> | Plus |
| 2L | 15025390..15025524 | 262..396 | 100 | -> | Plus |
| 2L | 15025615..15025785 | 397..567 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:34 Download gff for
FMO13976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15025847..15026063 | 568..784 | 100 | -> | Plus |
| arm_2L | 15021087..15021346 | 1..261 | 98 | -> | Plus |
| arm_2L | 15025390..15025524 | 262..396 | 100 | -> | Plus |
| arm_2L | 15025615..15025785 | 397..567 | 100 | -> | Plus |
