FMO13978.5prime Sequence
312 bp (277 high quality bases) assembled on 2014-01-10
> FMO13978.5prime
TCAGTCGACATGCCAGCAGTCAGTATTTTGGACTTCCGCCGCCAAGACGT
CCACATGGCCATAAAAAAGAGATATGTAAAGCGCCTGTTGCGCAAAGTGG
TCCTCCTCTTGGTGGTCATCGTCACTGTGTCCTTGGTCACCACTTTGGTG
GTCGAACGGCGAATGAAAAATGCGGCGGAGCTGACGGAACAACTCGATCC
GAATGGAGATCCCATAACGCCCGTTTTTAGGGCTGCCAATATACATCTAA
CTCGGAAAGCGCCACGACCACCATTTCTCCCTCGCACCTCCCCCTCTACA
TATCCCGAGAAG
FMO13978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pgant4-RC | 2543 | CG31956-RC | 151..423 | 5..277 | 1320 | 98.9 | Plus |
| pgant4-RB | 2411 | CG31956-RB | 19..291 | 5..277 | 1320 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3472753..3473025 | 5..277 | 1320 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:23 has no hits.
FMO13978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:36 Download gff for
FMO13978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgant4-RB | 15..300 | 1..286 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:39 Download gff for
FMO13978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgant4-RB | 15..300 | 1..286 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:39 Download gff for
FMO13978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3472749..3473034 | 1..286 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:36 Download gff for
FMO13978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3472749..3473034 | 1..286 | 96 | | Plus |
