FMO13980.5prime Sequence
259 bp (258 high quality bases) assembled on 2014-01-10
> FMO13980.5prime
TCAGTCGACATGTTAAATTACATCAAGAGGCACGCCAGCCGACGTCGCAG
CAGCCAAGATGCCACGGATGCCATTTGTGGCCAAATGCCAGCGTATGATG
TGGACACCAACGACGTTGCTGGAGCTGGTGATGCAGCCAACGCTCACAAA
CGACACTCGCTGCGCTCCACAACCAGTTTCTGCGACGAAGTGTTCCTAGA
AGCGGAGGAGGAGGGCGGCGTGGGAACCACAGGAGGAGGAGGAGGAGGAG
GAGGTGGTG
FMO13980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pkaap-RA | 2439 | CG4132-RA | 155..404 | 10..259 | 1250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16288600..16288821 | 38..259 | 1110 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:28 has no hits.
FMO13980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:41 Download gff for
FMO13980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pkaap-RA | 149..404 | 4..259 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:43 Download gff for
FMO13980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pkaap-RA | 149..404 | 4..259 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:43 Download gff for
FMO13980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16288438..16288471 | 4..37 | 91 | -> | Plus |
| 2L | 16288600..16288821 | 38..259 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:41 Download gff for
FMO13980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16288438..16288471 | 4..37 | 91 | -> | Plus |
| arm_2L | 16288600..16288821 | 38..259 | 100 | | Plus |
