FMO13984.5prime Sequence
435 bp (435 high quality bases) assembled on 2014-01-10
> FMO13984.5prime
TCAGTCGACATGTGCTCTATGTCAGACTACGGAGCACGCCCCAAAAAACC
CATGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGCAAGAACATAA
GAGCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAAGGGCGGT
GAGATGTGGCGAGCCATGGCCGATGAGCACAAGATCGTGTGGCAGGAGTC
GGCCAGCAAGGCAATGGCCGAGTACAAGGAGAAGTTGGAGAAGTGGAATG
CCTTCAAGGAGCACCAGACGGAGTCGTTTCCCCATATCTATGAAGCTCCG
TTGTCCTCTCGATTCTCAAAAACTAACCAAAGGCCAACCCTTTTTGTGTA
CGACAGCAAGGATGAAGCAATGGCTCCGATCTGCAGGACGTGCTTCTCAA
AGGCCAAGTGCTTTCACGCAAGCTTTCTAGACCAT
FMO13984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7046-RB | 550 | CG7046-RB | 67..465 | 19..417 | 1995 | 100 | Plus |
| CG7046-RA | 588 | CG7046-RA | 105..503 | 19..417 | 1995 | 100 | Plus |
| CG7045-RA | 553 | CG7045-RA | 99..345 | 19..265 | 1010 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22493263..22493661 | 19..417 | 1995 | 100 | Plus |
| 3R | 32079331 | 3R | 22491927..22492173 | 19..265 | 1010 | 93.9 | Plus |
| 3R | 32079331 | 3R | 22492202..22492304 | 315..417 | 290 | 85.4 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:07 has no hits.
FMO13984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:27 Download gff for
FMO13984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7046-RA | 105..511 | 19..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:27 Download gff for
FMO13984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7046-RA | 105..511 | 19..426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:27 Download gff for
FMO13984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22493263..22493669 | 19..426 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:27 Download gff for
FMO13984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18318985..18319391 | 19..426 | 99 | | Plus |
