FMO13991.5prime Sequence
726 bp (726 high quality bases) assembled on 2014-01-10
> FMO13991.5prime
TCAGTCGACATGATCTACGCAATTCTAGTGCTCTGTCTGCTGGGCAGTTG
TTGCCCAGCAATGGCCCAGAAGGTCGAAAAGGATCCGCTGGCCAAGGAAC
AAAATACCCGTTTGGCCGGCATCTATGTGAAGGATGGCAACGAAAATGGC
CAGCTGAGATTCCTGGCATCGGGCTTGAACAGTGGCAGCAGCAGCACCAG
CTCTTCAAACACCGGTATCAACTCGGCCCTGAATCAGTACATAACCAATA
AGCAGGATATGCTGGAGCAACTGCGTCCCACTTCGGGCACCACATCAACG
GGAACGGGAGCTGTTACGGGCACATCGACGGGAACAACAGGAACGACTTC
GGGAACCGGAACTGGCCTGGTCACCACGACTTCCAATGGAGCTATCTATG
TGAACCTGGGCAGTTCGGGATCCTCATCATCATCGTCTTCCTCCTCGTCG
GCCACCAATGCGGCCATTAATCAGGTCATCTATGGATCCTCGCCAGTTGC
CGGTCTCTTGCCGCAGATCGTTGGCCAGGCGGTGTCCAGTCGAGTGCGTC
CCGGTGGCCAGAACAATAGGAGGCGCGTTCCCGCCCGTAGGCGCCGGGTC
AACAAGAGGCGTGGCAGCATTAACAACAACAATCAGCGACGTCGCCGGCG
TGGCAACAAGCGGGGCAAGAATAATGCCCAGGTGATGGTGGTGCGACCAA
ATCGCGGTGCAAGCTTTCTAGACCAT
FMO13991.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4116-RB | 868 | CG4116-RB | 14..712 | 10..708 | 3480 | 99.9 | Plus |
| CG4116-RA | 948 | CG4116-RA | 94..792 | 10..708 | 3480 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3066771..3067469 | 708..10 | 3480 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-29 00:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6840..7049 | 178..377 | 134 | 55.9 | Plus |
FMO13991.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:53 Download gff for
FMO13991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4116-RA | 84..792 | 1..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:01 Download gff for
FMO13991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4116-RA | 84..792 | 1..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:01 Download gff for
FMO13991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3066771..3067479 | 1..708 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:53 Download gff for
FMO13991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2960804..2961512 | 1..708 | 99 | | Minus |
