FMO13993.5prime Sequence
874 bp (874 high quality bases) assembled on 2014-01-10
> FMO13993.5prime
TCAGTCGACATGGCCGTCATGGCTTGGCTAGCAAGGCTCGCACTTTTCTA
CACGGCAACCTTCCTTCTGGCAGGAGCCTCTGGCGAGGATGGAAAAATCG
TCAACGGCACTACAGCTGGCCCGGGGGAGTTTCCCTTTGTGGTCTCGCTG
CGACGCGCGAAGAGCGGACGTCACTCCTGCGGCGCTACGCTGCTCAACCC
GTACTGGGTCCTGACAGCCGCCCACTGCGTGCGAGGCTCCTCGCCAGAGC
AGCTCGACCTGCAGTACGGCAGCCAGATGCTGGCGCGAAACTCCAGCCAG
GTGGCCCGCGTGGCCGCCATCTTCGTCCATCCAGGGTACGAGCCGGAGGA
CAAGTACGTCAACGACATCGCATTGTTGCAGTTAGCGCAGTCCGTCGCTT
TGAGCAAGTTTGTCCAGCCGGTGCGTCTGCCGGAGCCTCGACAAGTCACG
CCCGGAAACGCCAGTGCTGTCCTCGCGGGCTGGGGATTAAATGCGACGGG
CGGCGTGGTCCAGCAGCATCTGCAGAAGGTCAAACTGCAAGTGTTCAGCG
ATACCGAGTGCAGCGAGCGCCATCAGACCTATCTGCACGACAGCCAGATC
TGTGCGGGATTGCCCGAAGGTGGAAAAGGCCAGTGCAGCGGCGACTCCGG
AGGCCCGCTGCTTCTTATTGGCTCCGACACCCAGGTGGGCATTGTTTCTT
GCAGCATAAAGCCCTGTGCACGGCCACCGTTTCCGGGCGTCTTCACCGAG
TGTCGGCCTACGTGGACTGATTGTAGAGACGGTAAATAGCTATTCGCCCC
CGTCGTCGCTTTGGTGGGCCAGCTGATTGTGGACGATCCCCGCTAGCCTA
AGCAGCGCAAGCTTTCTAGACCAT
FMO13993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32808-RA | 1063 | CG32808-RA | 172..1023 | 10..856 | 4120 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1469161..1469646 | 495..10 | 2430 | 100 | Minus |
| X | 23542271 | X | 1468733..1469099 | 856..495 | 1570 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:04:05 has no hits.
FMO13993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:57 Download gff for
FMO13993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32808-RA | 167..1026 | 2..860 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:06 Download gff for
FMO13993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32808-RA | 167..1026 | 2..860 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:06 Download gff for
FMO13993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1468730..1469098 | 496..860 | 97 | <- | Minus |
| X | 1469161..1469651 | 2..495 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:57 Download gff for
FMO13993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1362763..1363131 | 496..860 | 97 | <- | Minus |
| arm_X | 1363194..1363684 | 2..495 | 99 | | Minus |
