FMO13994.5prime Sequence
404 bp (262 high quality bases) assembled on 2014-01-10
> FMO13994.5prime
TCAGTCGACATGAACATCGTAAGCACTCAACTAGGGAATAGTTTGTATAA
CTGCGTGCGATCTAATCTAAGATGGCCCTTGTGGACTCGATCACATTTTA
CCTACTATCCTACACGTATGGGAACTGGAAAACGAATGAATATGTTTAAC
GCCATTAATAACGCAATGGATTTGGCTCTAGACGAAAACAAATCCGCATT
GTTGTTTGGCGAGGATGTGGGATTCGGTGGAGTTTTTCGGGTGTTCAGTA
ATCTACGGAATAAGTACGGAAGTCACCGGGTTTTTATACCCCCTTATGTG
AGCAAGGATCCCAGGGACCCCCGGGACCGACAACTTTTTAAAACCTTCTT
TGGGGCGCGGGCCAGGGAAGGGGCAAACCCTAACCAAACCTAACCCAACC
CCAC
FMO13994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17691-RF | 479 | CG17691-RF | 85..393 | 10..316 | 1390 | 97.4 | Plus |
| CG17691-RE | 1221 | CG17691-RE | 85..384 | 10..308 | 1385 | 98 | Plus |
| CG17691-RC | 1244 | CG17691-RC | 108..407 | 10..308 | 1385 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 1590654..1590884 | 10..240 | 1155 | 100 | Plus |
| 2R | 25286936 | 2R | 1590939..1591009 | 240..308 | 210 | 93 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:34 has no hits.
FMO13994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:44 Download gff for
FMO13994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17691-RG | 86..415 | 3..330 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:46 Download gff for
FMO13994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17691-RF | 79..393 | 3..316 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:46 Download gff for
FMO13994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 1590648..1590883 | 3..239 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:44 Download gff for
FMO13994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ArmU | 1178965..1179200 | 3..239 | 98 | -> | Plus |
