FMO13995.5prime Sequence
726 bp (726 high quality bases) assembled on 2014-01-10
> FMO13995.5prime
TCAGTCGACATGCGAAATAAATTTCAATCCGCTATTAGGGGCGTAACGCG
ACAATACATTATAAGATCGTGGCCCCGAGGCAGAGAGCTATTGAGGACGC
AACTGATTATCCCGCCATCTTCTACATCTAGCCCATTTACCTGTAGAAAC
TACTCAAAGTTTAGCACACATTTGTCTATGGAGCGGGCGTTGGAGTTGCT
ATGCAACCTTGATGACGAGGAACGCGGCAACCTGCGCTCCGCTCTTGGCA
GGCTAGATGCCGACAAGGAAAAAAAATTATACGAGATTGAGACGGCAGCA
TCCCCCACGGCAGGTCAATTGTACAGCATTTTCTTTGTAAATGCAGTGCC
GTTTATCGCTTTCGGATTCCTTGACAATTTCATAATGATCATGGCGGGTG
AATACATTGAATATTATTTGGGCCACTTTATAACGCTGTCTACAATGGCA
GCCGCAGGACTAGGAAACACCATAAGCGATATTTTAGGCATCACTATGGC
CACCTACGTTGAGAATGGGTGCCAGATATTGGGTCTAAAGCAGCCCAATT
TGACTCCAGCGCAATTTGAATTAAAGTCTAGCAAGCGGTCTTCAAGTTAC
GGACGGATTGTCGGGATCACTGTAGGCTGTTTGCTTGGAATGTGTCCTTT
ATGGTTTATGGATGAAAAAGCAGATAAGGTGAATGTAAAAGATGAAATCC
CGAAAAATGCAAGCTTTCTAGACCAT
FMO13995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17715-RC | 1501 | CG17715-RC | 293..991 | 10..708 | 3495 | 100 | Plus |
CG17715-RF | 4284 | CG17715-RF | 352..1050 | 10..708 | 3495 | 100 | Plus |
CG17715-RE | 1804 | CG17715-RE | 873..1294 | 287..708 | 2110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 808244..808520 | 286..10 | 1385 | 100 | Minus |
2L | 23513712 | 2L | 22844571..22844847 | 10..286 | 1385 | 100 | Plus |
2R | 25286936 | 2R | 803458..803663 | 601..396 | 1030 | 100 | Minus |
2L | 23513712 | 2L | 22849428..22849633 | 396..601 | 1030 | 100 | Plus |
2R | 25286936 | 2R | 803291..803402 | 708..597 | 545 | 99.1 | Minus |
2L | 23513712 | 2L | 22849689..22849800 | 597..708 | 545 | 99.1 | Plus |
2R | 25286936 | 2R | 803717..803785 | 397..329 | 345 | 100 | Minus |
2L | 23513712 | 2L | 22849306..22849374 | 329..397 | 345 | 100 | Plus |
2R | 25286936 | 2R | 803836..803877 | 328..287 | 210 | 100 | Minus |
2L | 23513712 | 2L | 22849214..22849255 | 287..328 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:03:37 has no hits.
FMO13995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:45 Download gff for
FMO13995.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17715-RF | 352..1050 | 10..708 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:57:48 Download gff for
FMO13995.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17715-RF | 352..1050 | 10..708 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:57:48 Download gff for
FMO13995.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22844571..22844847 | 10..286 | 100 | -> | Plus |
2L | 22849214..22849255 | 287..328 | 100 | -> | Plus |
2L | 22849306..22849373 | 329..396 | 100 | -> | Plus |
2L | 22849429..22849632 | 397..600 | 100 | -> | Plus |
2L | 22849693..22849800 | 601..708 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:45 Download gff for
FMO13995.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22737303..22737579 | 10..286 | 100 | -> | Plus |
arm_2L | 22741946..22741987 | 287..328 | 100 | -> | Plus |
arm_2L | 22742038..22742105 | 329..396 | 100 | -> | Plus |
arm_2L | 22742161..22742364 | 397..600 | 100 | -> | Plus |
arm_2L | 22742425..22742532 | 601..708 | 100 | | Plus |