FMO14004.5prime Sequence
408 bp (408 high quality bases) assembled on 2014-01-10
> FMO14004.5prime
TCAGTCGACATGTTCGCGTTACGTGCTGCATCTAAAGCCGATAAGAATTT
GCTGCCATTCTTGGGGCAATTGTCTCGTAGCCATGCTGCCAAGGCTGCAA
AGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGGTGCAGTC
GTCGATGTCCAGTTTGATGATAACTTACCGCCCATTCTGAATGCCTTGGA
AGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAGCACTTGG
GAGAAAATACCGTGCGCACTATCGCCATGGATGGTACCGAAGGCTTGGTT
CGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTCCAGTTGG
TGCCGAAACACTAGGACGCATCATTAATGTTATTGGGAAGGCAAGCTTTC
TAGACCAT
FMO14004.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-beta-RD | 2048 | CG11154-RD | 27..403 | 10..386 | 1885 | 100 | Plus |
| ATPsyn-beta-RA | 1688 | CG11154-RA | 27..403 | 10..386 | 1885 | 100 | Plus |
| ATPsyn-beta-RC | 2026 | CG11154-RC | 347..741 | 10..386 | 1695 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1032907..1033223 | 74..390 | 1570 | 99.7 | Plus |
| 4 | 1348131 | 4 | 1031890..1031953 | 10..73 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:04:24 has no hits.
FMO14004.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:09 Download gff for
FMO14004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-beta-RB | 21..413 | 3..398 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:17 Download gff for
FMO14004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-beta-RA | 21..411 | 3..393 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:17 Download gff for
FMO14004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1031884..1031953 | 3..73 | 94 | -> | Plus |
| 4 | 1032907..1033229 | 74..398 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:09 Download gff for
FMO14004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1052510..1052579 | 3..73 | 94 | -> | Plus |
| arm_4 | 1053533..1053855 | 74..398 | 98 | | Plus |
