FMO14012.5prime Sequence
432 bp (432 high quality bases) assembled on 2014-01-10
> FMO14012.5prime
TCAGTCGACATGGTCAAGCTGGCATCAACATCCAATGCCATTTGGTGGAT
TAAGAATCCCAAGGCAGCCGGGGAACATAATTCCAAAGGTAAACGCAAGG
AGTCCTTGGGCTCAGCCTTCTGCTTGGATATGGCGGATCTGGTTAGAAAC
ATATCCCTACAGGGTTACAATAAGCTTTTGTCACCGGACTTGACCTTGGG
ACAAAGATTGATTTGGTTGCTGGTACACATGGCCACCACCGTCTCCCTGA
TTGTGGTGCTCTCGCTAACATGGGAGCAGTTCGTGGCCCAATCCTTTGTG
ACCAATCTGAAGGATCCTCTTTTTCCAGTGGAGAATGTGCCATTCCCGGC
TGTTTCCATCTGCCCCAACAATCGCATCTCTCGCCAGGCAGTTATCCAAT
ATGCTGAAGAATTGGCAAGCTTTCTAGACCAT
FMO14012.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ppk22-RC | 532 | CG31105-RC | 91..495 | 10..414 | 2025 | 100 | Plus |
| ppk22-RB | 1813 | CG31105-RB | 91..495 | 10..414 | 2025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24859243..24859452 | 414..205 | 1050 | 100 | Minus |
| 3R | 32079331 | 3R | 24859515..24859711 | 206..10 | 985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:04:16 has no hits.
FMO14012.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:04 Download gff for
FMO14012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31105-RB | 35..452 | 1..422 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:12 Download gff for
FMO14012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ppk22-RB | 83..500 | 1..422 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:12 Download gff for
FMO14012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24859515..24859719 | 1..206 | 98 | | Minus |
| 3R | 24859236..24859450 | 207..421 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:04 Download gff for
FMO14012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20684958..20685172 | 207..421 | 98 | <- | Minus |
| arm_3R | 20685237..20685441 | 1..206 | 98 | | Minus |
