FMO14014.5prime Sequence
411 bp (411 high quality bases) assembled on 2014-01-10
> FMO14014.5prime
TCAGTCGACATGCAGTACAATCAGCAGCCGGCGGGAGCGCCGGGCTATCC
CCACCAGATGCCCCCACCGAGCTATGAGCAGGTGGTGCACGTGCAGGCGC
CAGTTCGGGTGGTTCACCACACGACAGCACCTCCGCCCGTGGTGATCATA
CAACATCAAGCTGTATTGCCGGTGGGTCCGGATCCCACCTTCATCACCTG
CCCGCATTGCCATGTCCAGAAACTGACCCGCGTGGAGTACTCGCCCAGTG
TGAAAACTCACTGCATGGCCGCCATTCTATGCATCGTTGGCCTCTGGTGT
TGTGCCTGCCTGCCTTACTGCGCCACCAGCTGCATGAACGCCAATCACTT
TTGCGGCAATTGCAATAAGTTCGTCGGCGTCTACAACAGCGATGCAAGCT
TTCTAGACCAT
FMO14014.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30273-RB | 1234 | CG30273-RB | 28..411 | 10..393 | 1920 | 100 | Plus |
| CG30269-RB | 1234 | CG30269-RB | 28..411 | 10..393 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22667182..22667326 | 10..154 | 725 | 100 | Plus |
| 2R | 25286936 | 2R | 22667383..22667518 | 155..290 | 680 | 100 | Plus |
| 2R | 25286936 | 2R | 22667589..22667692 | 290..393 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:04:49 has no hits.
FMO14014.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:21 Download gff for
FMO14014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30273-RA | 19..411 | 2..393 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:33 Download gff for
FMO14014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30269-RB | 19..411 | 2..393 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:33 Download gff for
FMO14014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22667173..22667326 | 2..154 | 97 | -> | Plus |
| 2R | 22667383..22667518 | 155..290 | 100 | -> | Plus |
| 2R | 22667590..22667692 | 291..393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:21 Download gff for
FMO14014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18554678..18554831 | 2..154 | 97 | -> | Plus |
| arm_2R | 18554888..18555023 | 155..290 | 100 | -> | Plus |
| arm_2R | 18555095..18555197 | 291..393 | 100 | | Plus |
