FMO14015.5prime Sequence
756 bp (756 high quality bases) assembled on 2014-01-10
> FMO14015.5prime
TCAGTCGACATGGTTTTTGAAATGTCGAAATTCGTTGGCGTTGCCGACAT
AACCGAGAACAAGAAAATCTGGCGCATGCTGCTCGGCGAACTGGTGGGCA
CATTTTTCTTGATCTTCGTCGGCGTTGGCAGCACGACGAGCGGAAGTGTA
CCACAAATCGCATTCACCTTTGGCTTGACGGTGGCCACCATCGCCCAGGG
CTTGGGCCACCTCAGTGGCTGTCACATTAATCCGGCGGTCACCCTTGGAT
TCCTGATCGTTGGTGAGATCAGCATTCTGAAGGCTGCCTTCTACATCATC
GTCCAATGCGTGGGCGCCATTGCTGGAGCGGCTGTGATAAAGGTGGCACT
CGATGGAGTGGCTGGTGGCGACCTGGGAGTATCCTCCTTTGATCCCTCCC
TGAACTGTGCACAGGCGGTGCTGATCGAAGCGCTGATCACCTTTATTTTG
GTTTTCGTGGTCAAGGCTGTTTCGGATCCTGGACGCCAGGATATCAAGGG
ATCAGCGCCACTGGCTGTTGGTTTGGCCATCGCCGCTGGCCATTTGTGTG
CAATCAAACTGAGCGGTGCCAGCATGAATCCCGCCCGGTCCTTTGGTCCC
GCCGTAGTGCAGGGCGTCTGGACCTATCACTGGGTTTACTGGGTGGGTCC
CATTGCCGGCGGCCTGTTGGCCGGAATCATCTACAGATTAATCTTCAAGG
TACGCAAGGGCGATGATGAGACCGACTCGTACGACTTCGCAAGCTTTCTA
GACCAT
FMO14015.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drip-RC | 1514 | CG9023-RC | 353..1081 | 10..738 | 3645 | 100 | Plus |
| Drip-RD | 1288 | CG9023-RD | 135..855 | 18..738 | 3605 | 100 | Plus |
| Drip-RE | 1180 | CG9023-RE | 28..747 | 19..738 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11412632..11412988 | 552..196 | 1785 | 100 | Minus |
| 2R | 25286936 | 2R | 11412389..11412574 | 738..553 | 930 | 100 | Minus |
| 2R | 25286936 | 2R | 11421257..11421437 | 199..19 | 905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:04:52 has no hits.
FMO14015.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:23 Download gff for
FMO14015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drip-RC | 346..1084 | 1..742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:35 Download gff for
FMO14015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drip-RC | 346..1084 | 1..742 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:35 Download gff for
FMO14015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11421258..11421442 | 14..198 | 98 | | Minus |
| 2R | 11412385..11412574 | 553..742 | 98 | <- | Minus |
| 2R | 11412632..11412985 | 199..552 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:23 Download gff for
FMO14015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7299890..7300079 | 553..742 | 98 | <- | Minus |
| arm_2R | 7300137..7300490 | 199..552 | 100 | <- | Minus |
| arm_2R | 7308763..7308947 | 14..198 | 98 | | Minus |
