FMO14016.5prime Sequence
717 bp (717 high quality bases) assembled on 2014-01-10
> FMO14016.5prime
TCAGTCGACATGGTGGAGGCAGCTCTTCAAACTGATCCAGAAAATGAAGA
GCTATTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTTACTCGTG
ATTTGATACAAACTCAACTGGAAGAACAAAATAAATCTTCATATGTGGAG
CCATCATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAATAGAAGC
AGCTCTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATTTGGAAAA
AAGGAGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTACTACGAT
GCAACTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAATATTCGA
TGCCTATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGTGAACGTA
CTATTCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCCCAATCAA
AAAGAATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCTTCAAGGA
CTTGGAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAATTTTAACA
ACAAAAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATTTGCGTCT
CCGGATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAACTGCAGG
AAAGGGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAAGGTCTTG
CAAGCTTTCTAGACCAT
FMO14016.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-RB | 1163 | CG17454-RB | 425..1114 | 10..699 | 3450 | 100 | Plus |
| CG17454-RA | 880 | CG17454-RA | 145..831 | 13..699 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23715901..23716321 | 12..432 | 2105 | 100 | Plus |
| 3L | 28110227 | 3L | 23716369..23716640 | 428..699 | 1345 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:04:54 has no hits.
FMO14016.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:24 Download gff for
FMO14016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 418..1114 | 3..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:37 Download gff for
FMO14016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 418..1114 | 3..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:37 Download gff for
FMO14016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23715901..23716320 | 12..431 | 100 | -> | Plus |
| 3L | 23716373..23716640 | 432..699 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:24 Download gff for
FMO14016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23709001..23709420 | 12..431 | 100 | -> | Plus |
| arm_3L | 23709473..23709740 | 432..699 | 100 | | Plus |
