FMO14019.5prime Sequence
1106 bp (1008 high quality bases) assembled on 2014-01-10
> FMO14019.5prime
TCAGTCGACATGGCCGAAGTTGCTGAAACCCCGAGTGTGGAAGCCCAGGA
AGAGGTAGCACAGCCCGCCGAGGCGCAGGTGCTGGAGGCGAAGAACGGCG
ACGCCAAGAAGGACCCGGCTCCCGCAGCAGAGGAGGCCGCTGGCGGCTTC
ACCAAACAGGAGCGCGCCATAATCCGGCAGGTAGAGTACTACTTCGGCGA
TGCCAATCTGAATCGGGACAAGTTTCTGCGCGAGCAGATCGGCAAGAACG
AGGACGGCTGGGTGCCCCTGTCGGTGCTCGTTACCTTCAAGAGATTGGCC
TCCCTGTCCACGGACTTATCTGAGATCGTGGCTGCCCTGAACAAATCCGA
GGAGGGCCTCGTGGAGATTAGCGAAGACAAACTTAGCCTGCGTCGCCATC
CGGAGCGTCCTATTCCAGAGCACAACGAAGAGCGGCGCAAGGAGATCCAG
GAACGGACCGCATACGCCAAGGGCTTCCCCCTAGATTCGCAGATTAGCGA
ACTGCTCGACTTTGCTGCCAACTACGACAAAGTGGTCAACCTGACCATGC
GCAAGCACTATGACAAGCCCACCAAGTCGTACAAGTTCAAGGGCAGCATC
TTCCTTACTTTCGAGACCAAGGACCAGGCAAAGGCCTTCCTCGAACAGGA
GAAGATCGTTTATAAGGAGCGCGAGCTGCTGCGTAAATGGCAGGTGGACT
ACCTTTAAGGAGAAGCAGGAGGAATACGCCCAGAAGAACGAGAAGCGCAA
AAACAAAAAGGAGGCCAAGCCTGAGCCTGCCTTCGAGCTGCCCAAGAACG
CCATTGTTGTCTTCGAGGGCGCTCCGGAGACATCTAGCCGCGAGGAAATT
CGCGAAGCCTTCGAGAAGATCAAGGACTTCGAGGTGCCTACATTGAGTTC
GCAAGGGCGAAACCAAGGCTCTGTGCGGCTGACGGAGCCGATGCGCCGAA
AGTACATGCCAAGTGAGAGGCAGCTCAAGTTCAAAGATGAGTCTCTCTGT
CGCTGCGAAGCCCCGAGGAGGAGGAGAAGGAGTCATCGCAGCCCTGAATT
CTTGAAGAGCGACCCGATTCCCAGAACAGGGCAAGCCCTCATCCAAGGCC
CCCGGC
FMO14019.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| La-RA | 1549 | CG10922-RA | 89..1190 | 10..1086 | 4795 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20348995..20349924 | 937..10 | 4425 | 99.4 | Minus |
Blast to na_te.dros performed 2014-11-29 00:05:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 3084..3113 | 217..246 | 114 | 86.7 | Plus |
FMO14019.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:28 Download gff for
FMO14019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| La-RA | 81..1133 | 2..1038 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:43 Download gff for
FMO14019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| La-RA | 81..1133 | 2..1038 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:43 Download gff for
FMO14019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20348809..20348878 | 974..1038 | 92 | <- | Minus |
| 2L | 20348955..20349932 | 2..973 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:28 Download gff for
FMO14019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20348809..20348878 | 974..1038 | 92 | <- | Minus |
| arm_2L | 20348955..20349932 | 2..973 | 98 | | Minus |
