FMO14020.5prime Sequence
630 bp (630 high quality bases) assembled on 2014-01-10
> FMO14020.5prime
TCAGTCGACATGCCGATACTTGGACAAATGTTTCCTGCAAAGCTGGGTCC
CAATTTGATGACAGCCTCCAAAGTGCTAAAAAGTCCTCTTGGCCAGGCGT
TAGTCTCCTTTTTGGTTGGCTACTTTGTCACCACAAAGTTGTCGCAATTT
TATGGCAAATTCAAGAGGGACTCTGAGAAATCCGATGAGTCGACGCAGTA
CTTGGACATGTACCCCAGGAAAGAGAGTCAGCCAAAGGACACCAAAGGAC
ACGATATCGTTCTGCTCACTCTGGAGGAGCTAACTGCCTTCGATGGCTCG
AGTCCCAGTCTACCCATTTACACCGCTCTGAATGGCCTCATATACGATCT
GAGTCCGGGCCGAGAAAAGTTCAGCAGTCACGGTCCGTACTCCCTATTGG
CCGGTTGCAATGCCAACAAGGTCCTGAACATTGCCTGCAGTTCCATGGGC
GTCTGCGCTGCGAACGTAATAAGTCGCTGGGAGCAGAGCCTAAGAGCCGA
ATTTAAAGTCGTAGGATATTTAGTCGATGCTGATATAGATATTATTAGCG
GTAGTCCAGTCAAACATACAAATTCGGCCATAGGGGAGCAAATGGAGAAG
AGTGATATCGTTGCAAGCTTTCTAGACCAT
FMO14020.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| c-cup-RA | 882 | CG15623-RA | 112..714 | 10..612 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1831795..1832366 | 612..41 | 2860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:05:06 has no hits.
FMO14020.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:29 Download gff for
FMO14020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c-cup-RA | 104..723 | 1..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:45 Download gff for
FMO14020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c-cup-RA | 104..723 | 1..623 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:45 Download gff for
FMO14020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1831786..1832366 | 41..623 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:29 Download gff for
FMO14020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1831786..1832366 | 41..623 | 99 | <- | Minus |
